| Tag | Content |
|---|
EnhancerAtlas ID | HS133-19096 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:42786200-42788250 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nkx3-2 | MA0122.3 | chr20:42787179-42787192 | TGAACCACTTAAA | + | 6.33 | | REST | MA0138.2 | chr20:42786547-42786568 | GCTGCTGTCCCTGCTCCTGTA | - | 6.07 | | RREB1 | MA0073.1 | chr20:42787803-42787823 | TGGAGGTGGGTGTGTGGGTG | - | 6.55 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_01607 | chr20:42785434-42787141 | Aorta | | SE_29672 | chr20:42786110-42786756 | Fetal_Muscle | | SE_36957 | chr20:42781055-42787281 | HSMMtube | | SE_40659 | chr20:42785229-42788018 | Left_Ventricle | | SE_48069 | chr20:42785504-42789373 | Psoas_Muscle | | SE_48679 | chr20:42785473-42786440 | Right_Atrium | | SE_51085 | chr20:42784848-42787746 | Skeletal_Muscle | | SE_54542 | chr20:42779699-42788494 | Stomach_Smooth_Muscle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I044156 | chr20 | 42784849 | 42789373 |
|
Enhancer Sequence | ACAATAGGAT TGTGAGCCAC CTGACCTGCA CTGTCGTTCC TAACCCTTAG ACCAACTTGT 60
CTTTATAGAT GAGATCATTG AGATTAGAGA AGAAAATGGA TCTGGCCAAG GACATACAAC 120
TAAGAAATGG CGGTGCCACA GATGGAGAAA CTGACACTCA GACAGGCCAA CTGATCTGCC 180
CACATCAACG AGCTAAAAAA ATGGCAAGGC CAGGATTTGG CCCTAGGCCT GCTTAACTCT 240
GAAGACCATG TGCCCAGTCT CCTGCCAGGC CATTTACATC CTCAGGAGGA TTGCTGCAGC 300
CCCAGGACAG GCGATTGCCT TTTACCACCC TCCTGCCAGA CCACACTGCT GCTGTCCCTG 360
CTCCTGTACC CCACTTTTGC TGGGTTGAAA AGGTTGAAAG GGGTACCCCA CTGCTGCTGT 420
ACCCCACCCC AAATTTGCAA AATGAGAATA AGAACAGTAT CTACCTTTTC AGGATCTTGT 480
AAGAGTAAAT GAGTTAATAT AGGTAAAGAC CTCAGAACAG TGACTGGCAC ATAGAGAATC 540
CTATTTAAGT GGTGGGTTAA AAACAAATCA TGTAAGTCAT GTAAAGCTGC ACCTGTGGCG 600
CGCTCTAAGG ACAGAACGGC AGCTGCCGGT GGACCTCATC CGCTCTCTAA GGGAGTCAGG 660
CTTGACCTGA GCCCTGAAGG AGGAGTAGAG GTTAAGTGAG TGGCAAAGGA ACCAGTATGA 720
ACAAAAGCTC TGTGGCAGGA GGAACTAAAG AAGGAAGAAC TAGCACAGAG GGAAGAAAAC 780
TCCAGGCTCA GGGAAAGAAT GACAAAAAAT AAGGCTGGGT AGGAGGGTGG GAACCTGATT 840
AGAAAAGGCC ACTCACTAAC TGAGTGATTT TGGACAAGTC ACCTTATCTC TCTGAGCCTC 900
ACTTAGCTCA TCTGCAAAAC AGAAATAAAC ACAGTACCTA TCATAAGGTT GTTAAAGGGA 960
CTGAGTGAGT CCATATTTGT GAACCACTTA AAATTGCCTT GTACCTAGTA GGTGCCATAA 1020
ATGTTTGGAG ACAACATTAG AACTTTATCT GAAGCACAAT GAGAAGACTT AAAGGGGTTT 1080
GAATGTAGAT GATAGGGTGG GTGTTTAGTA GATGGGAGGG TGGATGGACG CATGGGTAGA 1140
TGGATAGGTG GGGGAGGTTG AATGAATAGA AGTTTGGTTG AGTGATAGAG GTGGCTGGCT 1200
GGGTAGCTGG ATGACCAGGC GGGTGGGTGG GAGTGGATGT TGTTTTAATG AACAGAAGTG 1260
TCGCTGGGTG GATAAATGGA AGTACTTGAG TGAATGGATG CGTGGCTGGA TGTTAAGATG 1320
GGTGGCTGGG CAGCTGGAAG CAGCTGAGTG AATGCAGGTG ATTGGTGGGT GAGGGGACGG 1380
GTGAGTGGTT GAAAGGGTAT CTGTATGTTT GAATGGGCAT CTGGGTAGTT GGACGGGTGG 1440
TTGAGTCGAT GAATGGATGG GTGATGAGCT GGTTGAGTAG GTAAAAGGAT GAAAAATTGG 1500
GTAGGTTGCA TGGAATAGAT AAGTAAATCT TTGAGTGAAT GGGTGGTTGT TCAGGTAGAT 1560
GTTAGGCTGT TGTTCAGGTG GATGTTCAGG TGTGATGTGG GACTGGAGGT GGGTGTGTGG 1620
GTGGAGGGGT TGTTCAGTGA GTGTTAGAGA AGTTAGTCAA TGAAGGAATT GGGTGGATTT 1680
GGATGGATGT TTGGGTGGTT GACTGCGAGG TTGTGTGGAT AGATGGATGA CTGGATGACT 1740
GGGTGGGTAA ACAGGAAGTG GAATGGGTAG GGGAATGGAG TGGATGACTG GAGAGATGGC 1800
TGTTCAGGTG GATATTAGAA AGGTTGGGTG AGTGGTAGGG TTAAGTCAGT GGAAGGGCTG 1860
GGTGTAACTG AGTGATGGAT GGATGGGTGA GTGAACAGGA GCCACCAGCT CCCGAAGAGC 1920
CTCCAATTAA CCCCTGAAGG TGATGGGGGT AAAAGAAGCA GAATCAGGCT TGGAGACAGG 1980
GCCTCCTAGG TTGCCCTGCC CCAGGACCCC CTTCTCCGAG GGGAGGCGAC CCCTTCCCAC 2040
CCCCACCGCT 2050
|
