Tag | Content |
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EnhancerAtlas ID | HS133-18934 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:33903940-33909040 |
Target genes | Number: 26 | Name | Ensembl ID |
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SNPs | Number: 3 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXA1 | MA0148.4 | chr20:33905183-33905199 | GTTTGTTTACATAAAA | - | 6.5 | FOXP2 | MA0593.1 | chr20:33905184-33905195 | TTTGTTTACAT | - | 6.14 | LMX1B | MA0703.2 | chr20:33907056-33907067 | TTAATTAAATT | - | 6.32 | MEF2A | MA0052.3 | chr20:33904613-33904625 | TCTATTTTTAGT | - | 6.27 | MEF2B | MA0660.1 | chr20:33904613-33904625 | TCTATTTTTAGT | - | 6.32 | MEF2C | MA0497.1 | chr20:33904612-33904627 | TTCTATTTTTAGTAC | - | 7.16 | Zfx | MA0146.2 | chr20:33904684-33904698 | CCCGCCTCGGCCTC | + | 6.01 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_02275 | chr20:33903592-33904575 | Astrocytes | SE_02275 | chr20:33905091-33909712 | Astrocytes | SE_26824 | chr20:33905238-33907989 | Esophagus | SE_28226 | chr20:33904907-33909177 | Fetal_Intestine | SE_29043 | chr20:33904883-33909293 | Fetal_Intestine_Large | SE_36174 | chr20:33905204-33909057 | HMEC | SE_39170 | chr20:33902769-33904556 | IMR90 | SE_39170 | chr20:33905039-33909136 | IMR90 | SE_44275 | chr20:33903565-33904581 | NHDF-Ad | SE_44275 | chr20:33905060-33909528 | NHDF-Ad | SE_44962 | chr20:33903616-33904509 | NHLF | SE_44962 | chr20:33905127-33909221 | NHLF | SE_45807 | chr20:33901892-33904692 | Osteoblasts | SE_45807 | chr20:33904873-33909959 | Osteoblasts | SE_51781 | chr20:33905671-33909330 | Skeletal_Muscle_Myoblast | SE_55706 | chr20:33898658-33904602 | u87 | SE_55706 | chr20:33904888-33910416 | u87 | SE_63567 | chr20:33905657-33909435 | HSMM | SE_64842 | chr20:33905143-33908040 | NHEK | SE_67595 | chr20:33898658-33904602 | u87 | SE_67595 | chr20:33904888-33910416 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 9 | Chromosome | Start | End |
chr20 | 33905232 | 33908904 | chr20 | 33905289 | 33905372 | chr20 | 33905735 | 33906821 | chr20 | 33906285 | 33906606 | chr20 | 33907570 | 33908807 | chr20 | 33907005 | 33907177 | chr20 | 33906912 | 33907531 | chr20 | 33907745 | 33907913 | chr20 | 33904117 | 33904254 |
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| Number: 2 | ID | Chromosome | Start | End |
GH20I035316 | chr20 | 33903730 | 33904477 | GH20I035317 | chr20 | 33904992 | 33910110 |
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Enhancer Sequence | GTAAGGACTC TGACTATCTG AACTGATGGT TTTGGAAATA GCCAAAAGGC ATTTGGAACT 60 TTATGTGGAG AACAAGATTT GTGCTTAACA ACTCTGACGG TGACCATGCC CACAGTCATC 120 TCATTTACGA AGCACCTGTC ATGGGCTGGG AGGTAGATGT GTTACAGTCA CTCAGACTGT 180 AAGTGACTGT GTGAGAGACT CAGACTGGTG AAGTGATGCC TTGTGTCACA CAGCAAATTC 240 ATGATAAAGC TGAGATCAGC ATCCAGGTCA GTCTGAATCC AGAGTCCACA CTCCTTACAG 300 TCTGCCAGGG TTCTGCTTCT GGGAGGATAA TTTTACTTTG GGTCACAAAT CAAAGACTGA 360 GTGATTTTAT CCTGTGGCTC ATAACTAGTC TCGGAAGAAA TGTAGAAAGG GTGATCTGGA 420 TTTAGACTCA GAAAACCTGG GTTCAAGTGA TAGTTTTGCT ATGTACACAG GATGTTATCT 480 TAAGCAAGTC AACCTGAGTC CATTTCCTTT TTCTTTTTTG AGACAGAGTC TCGCTCTGTC 540 ACCCAGGCTG GAGAGCAGTG GTGTGATCTT GGCTCACGGC AACCTCCGCC TCCCGGGTTC 600 ACAGCATTCT CCTGCCTCAG CCTCCCAAGT AGCTGGGACT ACAGGTGCCC GCCACCATGC 660 CCAGCTAATT TTTTCTATTT TTAGTACAGA CGGGGTTTCA CCGTGTTAGC CAGGATGGTC 720 TCGATCTCCT GACCTCGTGA TCCACCCGCC TCGGCCTCCT AAAGTGCTGG GATTACAGGC 780 ATGAGCCACC ACGCCCGGCC CATTTCCTTT TTTTTTGAGA CAGAGTCTCG CTCTCTTGGC 840 CAGGCTGTAG TGCAGCGGCA TGATCTCAGC TCACTGCAAT CTCCGCCTCC CGGGTTCAGG 900 CGATTCTCCT GCCTCAGCCT CCCGAGCAGC TGGGATTACA GGCACCTGCC ACCACACCTG 960 GCTAATTTTT TTGTATTTTT AGTAGAGATG GGGTTTCACC ATGTTGGCCA GGCTGGTCTC 1020 GAACTCCTGA CCTCAGGCGA TCAGCCCGCC TCGACCTCCT AAAGTGCTGG GATTACAGGC 1080 GTGAGCCACT GCGCCCGGCC CCTTTCCTAC ACACAGGGCT ATTTGGAAGA GCACGTGAGT 1140 TAGCATGCAT TCATTCATTA ATTTAATAAT GTATGTATGC TGAAAGCCTT GGTAAACTGC 1200 AGAATGCTCT GCAAATGTAA GGAATTATAA GTAATAACTT CTGGTTTGTT TACATAAAAC 1260 CAAAACCAGT TCCAATGCTT TACAGCCATG GATAATTTTC AAAAATGAAA GGATTGTGAA 1320 GCTCAAGGCT GGAAAATGTA GACTGGATGT AACTAGGAGT GCAAACCATG ACCTATCCCA 1380 CACACCTTCA ACCAGGGCTA CATTAGCCAT CCATCCTTGG TGTTCTCACA GCTCTCTGGG 1440 CATATTTTCT GCCTGGGTAC ACACGTGGTT TAGAGCTGCT TATGCACCTG TCTCTCCCAT 1500 TAGTCTGGGA GCTACTCAAG GGTCATAGGA ACCATGTCTG ATTAATCTCG GCACCCCCAT 1560 CATCTGGTCC AGAGCCTAAC CCAGAGCAGG GGCTAAGACA GGCTTGCTGG TAACTGAATT 1620 TTTACAAGGG CCTGTGTACT ACGCCATGCA TAGCATGTTC TATCCAACTA GTGTTTTAGG 1680 GGATTTTCTT CTTCTTCGCC TTTCTTTCCC CCTGTTGAAT ACCTTCTGTG TTTCTGGAAT 1740 TTCAGAAACA TATACTGCCA AACTTCTACT GTCCCATCTT CCAGAAAGGG GTAAAGGGAA 1800 GAGTCAAGAA ACAGGCCAGA GCTAGAGTTC ATTCCTTCTG TCATGTGAGG ATGAGACTAC 1860 AACTCAGACC TCCTGATACC CATACTTGGA GGATCTCCCT ACTCCCACAT GAGTTGTTCT 1920 CCTAATTGTG TTAGGAATAA TCACAGCCAC AAACGGATGA TATCAGAGGT GTCAAACAGT 1980 AAGGCAGGAG CATCTCTCAG AGGAAAACAT TCACTGAACC TGCCTAGCAG AGCTAGTTTA 2040 TGTCATGTAT CACACCATTA AGCTTTGGAG CAGGAAGGGC CCTCAGAGAT TACCTAGCTC 2100 AATACCCTTG AGGAAAGGGT GAACTGAAAC CCAGAAAGAA GAGACTTATT CAAGATCACA 2160 CATCAAGTTA GTATAAGAGC CAGGATTAGA ACCTGATTTC TGGGTAAGTG CTTTTCCTAC 2220 TTTACCATCT GCAGGGCATT TCCAGAGATC ATCAACACAT TCATCTGCAA ACCTCAGTTC 2280 TTGCTTTCCA GCAAGGCCCA CAAACATACA AACACATTTT CTCCTCTTGG GATACACCTG 2340 CATTCTGGTT GGCTACTGCC CAGGAAAAAC GGAGTGCAAG AGTAGAGTTC CTTACTAGCA 2400 AGGCTCCTTG ACTTCCTGGT CCTATATTCT AACTCCAGTG ACCTGTAAGC TGCCTCTCCC 2460 TTCACCTCTA GCTGAGACAA TGGCAAACTG CCACAGCTAG AAATGCTTTT CAGATATCAT 2520 CACCCAGGCT GGATTAGATC ATGAAAAGGG GCCTTCCTGG AAGAGGGTGG AAGTGAGATC 2580 AGTACAGACA CGTGATCTGC AGGCAACAGG TGAGGGCAAG TGACAGCACC TTCCTCAACT 2640 ACCGGACTCA CTCGGCAGGG CCCTTCTAGC TAGTCCAGCA GCCAAGGGGA GCAGGATATT 2700 CGCTCTGGTG AATCCCTGTT GGATTTTATT CCCTCATTTA AGTTTTTGGT TGCTGGTGTG 2760 CAGGTTCCCC ACCTCTCCAC TGCCAGATCA TTCTATATGG AGCACTCTGC CCATGACTAC 2820 ACAGCTGCAC CCAGCAGAAG AGAAACTCCT CCCAGATAGT GTTGGGCCGT TCTCTTATTA 2880 AACTCATCCT TTCCATAATG CTTTGCTTTT CATAAAAACC CATACATACA ACACCACAAG 2940 GAAAAGGTTC CTTTTATATC AGTTACTCAT ATTTTCCCAT TTATTTAAGC CATTAAAATT 3000 CATGCAGATA TTTTATAAGC CACCAGGATT CAGTGACTGG TATTACTGAA TGTTTAATAA 3060 TAAACTAAAC AGAAGAAATC AGAGGGTTAA ATGATGACTG CAATTCCTGT AATGACTTAA 3120 TTAAATTTTT ATTGAGTACA TAAACTATGA TGTCACCTCT AGCCAACCAC AGGCCTGCTT 3180 TCCCAGCATG TCACAGGGAG GGAGCACTCA ATAGGAGGCT TGGCTAAATG AGCAGCAGGT 3240 CTCAGCTGAA ATGGGGAGGG GAGTGAGGCT CATGTAACAC ACTCAATAAA TTATCCGTTC 3300 ATTTTTAAAC AAAGTCCATG AGTTATAATA TATTTGCCAT GCACTTTTTA TGACATAATA 3360 AAAATGTTAC CTTAAGGATT ACTTAACACA TACTACAAAT ATTATAGCAG AGGCAGGCAC 3420 AAGGGGCAAA GAAAACAAAC ACGAGCAGGC CAGGGACGGG TCCTGGAGTT TATGTCCCAG 3480 GGGAAACAGC ATAGTATATT AAAAAGGGAA TGCAAAAAAA AGGAAGGGAT GCAAGAGTTC 3540 AGGGTTACTA ATCGGCAGAT TAATGAATGA GACAACCAAC AGAGAACACA AGTAAGGCAA 3600 TAATGAATCT TGCAGGGCAC ATGTTTAATT AAAGTAGCAT TCTCAAGGAG GAATATTAGC 3660 TTTAAAGAGA TGCCAGTTCA TTTGAGGCCA ATTCGCTGCT CTCTTTCCCC TTTTCACTGT 3720 TGCTGCCTTA AAGATATTTA TGTGACTGCT TAACAGAGGA ACCAGACTAT GTGGATACAG 3780 GGACTGATGG GAGATCAAGT TTTAACTCCT CCATGGACTC TACAAGGCTT CTAGTGATCT 3840 GCTCTTGGCC ATCTTTTTTG CCTCCCCTCC TCTTGCCTCC CCATCTTACT TCACCCTGCA 3900 GTCAGTAAAG TATGTGCACA GATACATCAT GCTGTCATCT ATTTCTTAGT CATACTGCTG 3960 CCAGGAATTC TTCTCTTCTT TATCCACTGA TGGAAGGGAT GCTAACTCCT TATCCTCTAA 4020 GACTTAGCAC ACATATTTTC TCTACTAAGT CTGCCCTCTC CCCCATCTAC AGGTGCCCCA 4080 AAGTGATTCA AGTCTGGAGA CGGGTCCCAT CATTCATTAT TTACCAAGTG CCAATAACTG 4140 TGCTACAACT TTACACATTA GCCCACTTAA ACCTTCCCAA GGACTCTAAG AGACAGGAAC 4200 TGTTACTGTC TCCACTTTAG AGAAGAGGAA TCTGATGTTT GGGAAAGTTA AAGCTAGACA 4260 GCTAGGAAAT AGTGGGGTCA AGATAAGAAT ACAGAGCAAT CCAACTCCAT TGCCTACCTG 4320 TGTTGGAATA GACACTGGAA GGAATGTAGC TGCCCCTTCC TGTGCCCCAC AGCTCAGGCT 4380 ATCTGCAGAG GCAGAACTAA GAAATGCTAA TGTGGTCTTG AGTAAACACA ACTCAGAGAT 4440 TCCAGTTCCA GTGGCAGCTA GAGACAGCCA CCAGATGGGT CATCAGTGGC CGGTTACTAA 4500 TACATCAGAT ATCCCTAGTA GAGCCAAGCT CCACTCCTGG GAAAACCTGA GGTTGAGAGT 4560 GGGTGTAATT ATGGTGGGGG AATGGGAAAA CAGAAGAAAG TTGGTATGGA AAACACTGAT 4620 GAGCATGAAG GTGAGAATAA GCTTTAAGGT TACTGGCTTG AAGCAAAGTT GCTAACAGTA 4680 GCAGACTAAG AATTTGCTGG AATGAATGAA TGACAAAGGA CAGCTAGAGT TGCTGGCTGA 4740 AGCCTAAGGA CTATATCAAA TTCATCATAA GGCAACAATG CAACACAAGA TTGTAGGTCA 4800 TGTTTTAGTT TGCTGTAGTA GACAGTAATG CCACCACCAA TGCTTTGCAG TGCCAACGCC 4860 ATGTTCTACA GTCATTGTGC GGCAACAGGC TGATGTGCAC TGAACATCAG CTAGCCTATT 4920 TAAAGTTCAG GTTAGAAATT AGCCCACTGT GGAATATTTT GTGAGATACT TAGAAACAGA 4980 GTAAGAGTAG ACAGACAAGA GAGACGGGGG ACATGGAGAG ACCAAATAAA AAAGTCTACC 5040 TGTTAACTCA CATGCATTAC GACTGAAAGA TCTATTGAGG GTCTTTTAGC AATGATGACA 5100
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