Tag | Content |
---|
EnhancerAtlas ID | HS133-18633 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:17814820-17817160 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
E2F6 | MA0471.1 | chr20:17816401-17816412 | CCTTCCCGCCC | - | 6.62 | NFE2L1 | MA0089.2 | chr20:17816054-17816069 | TGTGCTGACTCATCG | - | 6.03 | Nr2f6(var.2) | MA0728.1 | chr20:17815197-17815212 | CGAACTCTTGACCTC | - | 6.24 | RFX5 | MA0510.2 | chr20:17816872-17816888 | GGTTGCCTTGGTGACC | + | 6.04 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_28415 | chr20:17816227-17818139 | Fetal_Intestine | SE_29297 | chr20:17816514-17817868 | Fetal_Intestine_Large | SE_44685 | chr20:17815161-17818015 | NHDF-Ad | SE_45164 | chr20:17815680-17817898 | NHLF | SE_50301 | chr20:17815721-17818326 | Sigmoid_Colon | SE_52789 | chr20:17815821-17818229 | Small_Intestine |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I017834 | chr20 | 17815441 | 17818274 |
|
Enhancer Sequence | GTCAAATAAA AGTCGAAGCA CAACCAACAA AGCAAAAAAA GTGTTTACAA CACATGCAGT 60 TGGCAAAGGC TAATTTCCTT AATATATAAA GCACTTTTAG AATCAATAAG AAAGAAATGG 120 CAAAGGATAG AGCAAAGCTC ATAGAAATGG ACCCACAACT GACCTTTTTT TTTTTTTTGA 180 GACTGAGTCT CACTCTGTTG CCCAGGCTGG AGGGCAATGG TGCAATCTTG GCTCGCTGCA 240 ACCTCCGCCT CCTGGGCTCA AGCAATTCTC CTCCCTCAGC CTCCCGAGTA GCTGGAATTA 300 GAGGTGCATG CCACCACACC CGGCTAATTT TTGTATTTTA GTAGAGACGG GTTTCATCAT 360 GTTGGCCAGG CTGGTCTCGA ACTCTTGACC TCAGGTGATC TACCCACCTG GGCCTCTCAA 420 AGTGCTGGGA TTACAGGAGT GAGCCACCTT GCCCAGCCCC ACAACTGACT TTTAAACATA 480 GGAGAAGATG CTTGACCACA CTAGTATTAA AAGCAAAAAT TATAATTATG ATTGTATACC 540 AATTGCTTTT AGCTAACAGA CTGGCAAAAA GTTTCATAGC ACTGTGTGTT GATGAGAGTA 600 TAGAGAGACA GACATTCTCA AATATTATTA CCGGGAGTAA AAAATCAGTA AGTACTATTA 660 CCCTAGAGGG CATTTTGACA ATATTTATAA AAATTTAAAA TGAACATATC TTTTGGCTAA 720 GCAATCCCAC TTCTGGGATT TATCCTGCAG ACACATGGGC ACACATGCCA AACAATCTAG 780 TGACAAAGCT CTCTGAGATA GCAACATTGG AAGCAACCCA AGTGCTTGGC AATAGGAAAT 840 TGGCTAAATA AATGTACCAT CCTGCAAGGG AATACTAGCA ACCATTTTTT TTAAATGAAG 900 CAGTACTTTA TGTGCTGATA TGAAATTATC TTCAAAATAT ATTAACATAC ATATATGCTC 960 TTGCTTGCAT AAAATGTCTC TGGAAAACGC ACAGGGCACT GGTTGCCTCT GCAGGGGGGA 1020 AATGGAGGCA GGGAGAGAGG CCACTTATGT TCGTGTTTGA TTGCATTAAC ATGCACATGT 1080 ATTACCTATT TTTAAAAATA ACATTTCTAT AGTTATTACA CTTGGGTAGG TCGGCTGTGG 1140 CTTCCCTAAG GATAAGGTTA GTTCCTCGAT TCAGGAGCCA AATGCCAAAG GGACTCCAAC 1200 AGTGATTCAC GTTTGGAAAC AGCCCGCGGG AATCTGTGCT GACTCATCGG AGGACCCAGT 1260 GGAACATGGC AGCTCCAAGG CAGAGCCAGC CTGAAACCCT GTGAACATGC TTTAGGACAA 1320 CCAGACGGTC AGAGCGAGAT GGGGTCAGGG TGGGGGACAC CCTGAGCCAA GGAGCCAGTG 1380 ACTTCCAGAA GAGTGAGGAG AAAATTCAAG GCTTTCCTCA TGAAAGGGGG CAGAGCCGGG 1440 ACAACATTCA AGGAGGCCAG GGGGATGTTG AGGGGGCCTG GCTGGAGGGC CTGGCAGGTG 1500 CATGGAGAGC CCCTTCCCAG ACAAAGACCT GGGCCCAGTC CCTGAGAAGC ACTGAGGCAC 1560 CCACCAGGCT GGAAGCAGAG CCCTTCCCGC CCCCGCCCCG GCCACATCCA CAGTTTGCTG 1620 GCATTTGCTG GCCTCCACCT CAGGCCCAGC TGAGTCAAGG AATTCCAAGG AACAGCCACC 1680 TCTTCCCATG CCCATCAAGG CGACCTTCCA TGGTTTCCGT GGGACGTTTG GTCACACTGG 1740 GCTCAGAAAT CTGCACTCTG TAAACTCACC GGTTTCTCCG TGACTGGGGT TTCCCTTTGT 1800 GCCTCAGTGT TCCTTTGGGA AATGTTCAAC CTTTTTTTGG CCTAGTTAAG GAGAAAGGAA 1860 TTTTTCCAGA CTCAGTCAGA GATGTTGGCT CAGCTTGATT GGGAGGGAAG GGTGATTTTA 1920 ATAAGGCCGG GGGTGGTAGT GGGGACAATG TGTGACCCCC CCGGGAAGTG GGACCGCACA 1980 CGGTACCGGG GTGGGCAGTT CTGGCTCCTC CTGACCTGGC TGTCCCTCCC CAGTGCCATG 2040 AGTTTTGAGC CTGGTTGCCT TGGTGACCCG TTTTCAGTCC TTATTCACCT CCTAACCATC 2100 TCATGTTCTC TCGAGCCTCC TTCCATCCCC AGCACAGTCC ACACACAATG TAAGTGCTCA 2160 AAAGTCGAAC TGTAGCACTG AGTTGAGGGG TGGTCAGCCC CGGTGAGCCC TGGTGTCTCA 2220 TCATGGTTTC CCCATGGCTG TCTCCACCCC TCTTCCAGAA AAGCTATTGA GAAATGGAAC 2280 TCTTTGACAT CACCCCTAGC TAAAGTTGCT GAAAACAGCT CAGAGGAGTG AATTCCACAG 2340
|