| Tag | Content |
|---|
EnhancerAtlas ID | HS133-18539 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr20:5130740-5131760 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr20:5131053-5131071 | TCTGCCTTCCTAGCTTCC | - | 6.02 | | KLF4 | MA0039.3 | chr20:5130830-5130841 | GCAGGGTGTGG | - | 6.62 | | Klf1 | MA0493.1 | chr20:5130832-5130843 | AGGGTGTGGCT | - | 6.02 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_02026 | chr20:5130553-5131834 | Aorta | | SE_04445 | chr20:5130748-5131764 | Brain_Anterior_Caudate | | SE_05195 | chr20:5130362-5132066 | Brain_Cingulate_Gyrus | | SE_08174 | chr20:5130437-5132175 | Brain_Inferior_Temporal_Lobe | | SE_41333 | chr20:5130517-5131870 | Left_Ventricle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I005149 | chr20 | 5130203 | 5131911 |
|
Enhancer Sequence | AGATCTAAAA TGTGGTATTT TCTTAAAGGA TCTTAAAAAA CGATCCATTT TTCAAAGTGC 60
TGCCACTGTG ATAACTGAGG AGGGCTTGGG GCAGGGTGTG GCTTTGTGTT GGCTGGCTGC 120
TCAGCAGGGC TGACCATGCA ATGACCAGTT GTCTGCCTGT GTCCATTTCT AGAAACAGGC 180
TCACTGGATT ATCAGAAGCA TTGGCCCTTG TTTTACCGGG ATGAGCAAAC AGACCTGCAA 240
TTCAGTAACT TGACATGTTG GAGTTTGAAC CCAGGTGTGC TGAATCTCAG TTCCATGTTC 300
TTTGCGTTAC GATTCTGCCT TCCTAGCTTC CTGGTCTCCG CCAGTCATTT TTCTCCCACG 360
GGTTGGCCAA AGAGCCCCTA ACACAGGGAA GACTTGCAAG TTTCTCAGGG TCAGCCAGCA 420
GGGCCATGAG GAGTGGGGCA GCCCTTGCCT TACTTTGTAC CCAGTCTCGG AGAGAAGGGG 480
AGGTGACAGG GGCCACTGGG TTCCATGGGG CCTGCAGGCC GAAAGCAAGG GCACCCTGGA 540
GCAGTGCAGG CCTGTGTGGC ACAGTGCCCT CATCCCGAGG CCCAACTCAG CCCCAGCCCC 600
AGCCTCTGCT GTGGAGCATT CCTGACGCTC CCACCCCATT TCCTCATCTC TGTCTCCTCT 660
CTAGGCTTCT TTGGAAATTG ACTGTCCAAA CCCTCATTAG GTGCTGTCTC CTCAGCAGAT 720
GGTCTCTGGA GTCAGGTTCT TTGTCTTCGA TTTCTGTAGC TCCCACGTGA TTCAGTAAAG 780
GCATGCTGAT TCATCATAGG GTTCCTGGCA GAAGGGCAAA ACTATCAGGG GAACAAAGTA 840
GCCAGAGATC ACATGCGGAG CCACCTTCTG ACTTGGTCAA GAACTCCTTG CTGGTCAGAC 900
CTGGCTGTTC CTAGCACGTA TGGTTGTCAG GAGGTTGAGT TGGTACTAAA TCAGCTGTGA 960
AGATTAGCAA CTGCCTGGGC AGTGAGAACC AGGCCTCTGG TTTCGGGAGG AATTTGTTGT 1020
|
