EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-17818

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr2:173306140-173307600

Target genes

Number: 5
Name	Ensembl ID

ITGA6	ENSG00000091409
AC078883.4	ENSG00000226963
AC078883.3	ENSG00000232788
PDK1	ENSG00000152256
AC093818.1	ENSG00000225205

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_18780	chr2:173290996-173308510	CD4p_CD25-_Il17-_PMAstim_Th
SE_23172	chr2:173305386-173307994	Colon_Crypt_1
SE_24198	chr2:173305917-173307879	Colon_Crypt_2
SE_24849	chr2:173305173-173308053	Colon_Crypt_3
SE_26058	chr2:173302288-173308819	Duodenum_Smooth_Muscle
SE_27809	chr2:173303133-173309247	Fetal_Intestine
SE_28663	chr2:173303059-173309690	Fetal_Intestine_Large
SE_31796	chr2:173305798-173307761	Gastric
SE_35837	chr2:173291379-173308852	HMEC
SE_50315	chr2:173305463-173307833	Sigmoid_Colon
SE_52439	chr2:173305272-173308732	Small_Intestine
SE_57569	chr2:173305982-173306304	VACO_503
SE_57569	chr2:173306371-173307741	VACO_503
SE_64259	chr2:173299215-173308629	NHEK

Enhancer Sequence

AGGCATGGTG GCTCATGCCA GTGATCCCAG CACTTTGGAA GGCTGAGGTG GGAGGAAGGC 60
CTGAGCCTAG GAACTCAAGG TGAGAGTGAG CTATGATTGT GTCACTGCAC TCCAGCCTGG 120
GTAACAGAGT GGAGACGCTG TCTCTTTAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA 180
AAATCAAACC TCAGTGCATA AGACACAGGT GTTTTCATCT GTGAACGAGA GTAGACACAT 240
TCTAGTAATA CCCAATGTTT TTGTGAATTT CTTTACAATT GAAACTATTT TCCACTTGTA 300
GAAGTTGGGA AGGAACTTGG GGAATGGCCT GGAAAGGTAG ACCACCATCC TCATTTCATA 360
GAACAAGAAA TGGAGACCTA GGATTTGTCA TAGTCCTGCA GCCAGCTACA GACAGAGCTG 420
TGCCTACAAT TCCCTTCTTG TCCTGAGTTG TTTCTGCTTC ATTTCCCACT AGAACCCCAT 480
CCCGCCCTCA CCCCTAAGCA GAGGTCCAGC TAGCTAATGT GTCTGTTTTT ATAAAATGCC 540
ACCAGAAGCT TAAGTACGTC GGTTCGTGTC CCATCAAACT TGTCCAGATC TCTTTCTCAT 600
CATAGAGAGG TACCATCCTG AGTTGCTCAG ATGATAAACA TTTCTCCATT AGAAACTAGG 660
CTCGGATTTG CCTGTGGCCA CAAATCCAGA AGCAGCTGTG TGTTCCCCAT GTTTCTCACC 720
AACCCCTGCG TCATGTTTCT GAATAAGGAG TCCTGGTTAC CGCCACACCC CTCATTCATT 780
GCTTTAGATT AGATGAAAGG CGAGGTGCCT GACTCAGGCC ACTGACTCAC TCTGCTTGGG 840
TGAACCCAGC TCCTCCCGGT AGGAAGTGAT TGCCCCAGGC AGGTTGAGGA GTGCCCACAG 900
CATCCAGGAC TAAAGCATTT GGACCCTGCA GCTATTTATA AACAGCACTT TACAGTGCTT 960
TCAGTCTGAA TATTGGGACT CCCCTAGAAA GGACAGATTC AGTCCTTTCT GAAAGGAGGA 1020
TAGACGAAGG GTGAGGAGTT CTTGTTGGAT GTATTTTCAT AGCTGAAAGG TTCCCCTGAA 1080
TGCTGTCAGT GCCATGGATG TTCATAGGGA AGGTTAGAGT TCCTGTCTCT GATGTCATTC 1140
ATTTTATGCT GCAGCTCACT TGACTGTGGG ACTCCCTAGG AAAGCTTATC TACCTTTTCA 1200
GCTGTTGCAC CTCTTTTCTT CCATGTAGTT TGCCCTCTGC CTTACATTCA CTCTTCATTG 1260
TAATGCCCCA GTTGCCAGCA CAGTGCCTGG CGCACAGTAG GTACGTGTTT GTGAGCTTGC 1320
TTTACTGATG TGTTGTCATG CCTCTGGAAC GGGCTGTAAA AATCAATCTT TGACTCTTTG 1380
CCAGCAACTG CCCACATAAA GAGAGCATGT GTGAGCTTGT TTTATGCAAT TACAAGGTTT 1440
GCTTCATGAC TTGTGGGCGC 1460