Tag | Content |
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EnhancerAtlas ID | HS133-16928 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr2:54803950-54807810 |
Target genes | |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxq1 | MA0040.1 | chr2:54807773-54807784 | CATTGTTTATT | + | 6.02 | HNF1A | MA0046.2 | chr2:54807149-54807164 | TGTAAATAATTAACA | - | 6.03 | HNF1A | MA0046.2 | chr2:54807149-54807164 | TGTAAATAATTAACA | + | 6.62 | HNF1B | MA0153.2 | chr2:54807150-54807163 | GTAAATAATTAAC | - | 6.13 | HNF1B | MA0153.2 | chr2:54807150-54807163 | GTAAATAATTAAC | + | 6.59 | NR2F1 | MA0017.2 | chr2:54806824-54806837 | CTGTTGACCTTTG | - | 6.78 | RREB1 | MA0073.1 | chr2:54805504-54805524 | TGTTTGTTGGTGTTTTTGGG | - | 6.57 | RUNX1 | MA0002.2 | chr2:54805746-54805757 | AAACCACAAAC | - | 6.02 |
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| Number of super-enhancer constituents: 67 | ID | Coordinate | Tissue/cell |
SE_00006 | chr2:54795695-54808079 | Adipose_Nuclei | SE_00896 | chr2:54802657-54804663 | Adrenal_Gland | SE_00896 | chr2:54806325-54806984 | Adrenal_Gland | SE_00896 | chr2:54806999-54807408 | Adrenal_Gland | SE_04102 | chr2:54803461-54804376 | Brain_Anterior_Caudate | SE_10400 | chr2:54805714-54810968 | CD19_Primary | SE_11005 | chr2:54790737-54825699 | CD20 | SE_11903 | chr2:54795467-54804954 | CD3 | SE_11903 | chr2:54805104-54808137 | CD3 | SE_12885 | chr2:54806626-54807961 | CD34_Primary_RO01480 | SE_13387 | chr2:54804541-54808139 | CD34_Primary_RO01536 | SE_14098 | chr2:54806403-54807663 | CD34_Primary_RO01549 | SE_14488 | chr2:54795303-54804872 | CD4_Memory_Primary_7pool | SE_14488 | chr2:54805070-54807930 | CD4_Memory_Primary_7pool | SE_15498 | chr2:54806491-54807991 | CD4_Memory_Primary_8pool | SE_15859 | chr2:54805479-54807711 | CD4_Naive_Primary_7pool | SE_16386 | chr2:54805988-54807944 | CD4_Naive_Primary_8pool | SE_16936 | chr2:54805321-54807943 | CD4p_CD225int_CD127p_Tmem | SE_17333 | chr2:54793892-54821363 | CD4p_CD25-_CD45RAp_Naive | SE_17873 | chr2:54795021-54811216 | CD4p_CD25-_CD45ROp_Memory | SE_18341 | chr2:54795035-54821330 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19520 | chr2:54804469-54808160 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20164 | chr2:54795681-54809753 | CD56 | SE_20822 | chr2:54806095-54808244 | CD8_Memory_7pool | SE_21502 | chr2:54803372-54804830 | CD8_Naive_7pool | SE_21502 | chr2:54805963-54808154 | CD8_Naive_7pool | SE_21966 | chr2:54795626-54804551 | CD8_Naive_8pool | SE_21966 | chr2:54805854-54819252 | CD8_Naive_8pool | SE_22380 | chr2:54795196-54811289 | CD8_primiary | SE_23128 | chr2:54803525-54806250 | Colon_Crypt_1 | SE_23128 | chr2:54806279-54807871 | Colon_Crypt_1 | SE_23914 | chr2:54806299-54806908 | Colon_Crypt_2 | SE_23914 | chr2:54807139-54807736 | Colon_Crypt_2 | SE_25070 | chr2:54803569-54807926 | Colon_Crypt_3 | SE_25877 | chr2:54804084-54808059 | Duodenum_Smooth_Muscle | SE_27348 | chr2:54806258-54807572 | Esophagus | SE_27627 | chr2:54794756-54809409 | Fetal_Intestine | SE_28537 | chr2:54794775-54810703 | Fetal_Intestine_Large | SE_29772 | chr2:54804536-54807845 | Fetal_Muscle | SE_31160 | chr2:54805683-54808040 | Fetal_Thymus | SE_31545 | chr2:54802687-54805201 | Gastric | SE_31545 | chr2:54805344-54806156 | Gastric | SE_31545 | chr2:54806192-54807558 | Gastric | SE_32493 | chr2:54794685-54809919 | GM12878 | SE_35875 | chr2:54796741-54804603 | HMEC | SE_38000 | chr2:54803941-54807936 | HUVEC | SE_39396 | chr2:54803412-54807973 | Jurkat | SE_40773 | chr2:54803413-54806814 | Left_Ventricle | SE_40773 | chr2:54806843-54807511 | Left_Ventricle | SE_42137 | chr2:54803569-54804912 | Lung | SE_42137 | chr2:54805064-54805813 | Lung | SE_42137 | chr2:54806257-54807405 | Lung | SE_43945 | chr2:54806647-54807844 | MM1S | SE_46220 | chr2:54804531-54807869 | Osteoblasts | SE_47832 | chr2:54806982-54807394 | Pancreas | SE_49907 | chr2:54803392-54808037 | RPMI-8402 | SE_50115 | chr2:54803395-54807898 | Sigmoid_Colon | SE_52386 | chr2:54803599-54807890 | Small_Intestine | SE_53342 | chr2:54804076-54805887 | Spleen | SE_53342 | chr2:54806289-54807792 | Spleen | SE_55277 | chr2:54806481-54807552 | Thymus | SE_60008 | chr2:54784446-54818579 | Ly4 | SE_61167 | chr2:54784367-54847020 | HBL1 | SE_61474 | chr2:54749764-54818736 | Toledo | SE_62304 | chr2:54783676-54846716 | Tonsil | SE_64270 | chr2:54795687-54804439 | NHEK | SE_66257 | chr2:54803412-54807973 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 6 | Chromosome | Start | End |
chr2 | 54804656 | 54804744 | chr2 | 54805069 | 54806177 | chr2 | 54806307 | 54807716 | chr2 | 54806490 | 54806642 | chr2 | 54806662 | 54807722 | chr2 | 54806978 | 54807402 |
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| Number: 1 | ID | Chromosome | Start | End |
GH02I054566 | chr2 | 54794112 | 54810964 |
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Enhancer Sequence | CAAATTACAT TCTGAAAGGG AATACTAGGT AAGTGATCCC AAACATGCAA ATATCATTCC 60 TTGGTCCTGG GATGTGGGGG AAGCATTTTG GAGGAATTGA CATTGATTGC AAGTTTTTAA 120 ATATGACCTG GATTAGATTA TGAGATGATG GGTGCTTGGG GGTAGGGGTG TACAGAGGGA 180 GTCATGAAAC CATGGAGGAT GTTGGGGAAT GGCTAGAATT CTACTTGGGA CATCATGCAA 240 GTTTTTTTTC CCCTTCCATT TCATTTGTTA ATGCTTATTA TTAGTTGGGG GTTTTGCCTC 300 CTTTTTGTTA GCCAACAGCC AGCTAATCTT GGCACAGGTC CCGGGAATCA GGTGCTGCTT 360 AGCAGCTGAT GTTGGTTAAA TGACCTTGGA CAAGTGACTT GCATTTCAGT TCTCTAACCT 420 GTTAGGGTTG TAGATTGTCT GATACAGATT TGAAGGCCCC TGCAAATAAA TGCATGGCCG 480 TTTACTCTGG TCACTTTCAT TTTACCGAAT GTGCTCCCCC AAGGCTCTTC TGGGTAGATG 540 CCCACTGCCA AAACATTAAG CATTTTTGGC TTCTCATGCT TTGAGCTCAC AAAATCAGTC 600 CTGTGGGAAA CCTAACAAGC TACAAAGGAG AGGGAAAGCA AAAGAAAAGG TATATGGATT 660 CTCATGCAAA GAGAGAAGGA AAGTAGGTCC CTACCTAAAG TCTAGCCCTG TATTGGTGGT 720 GGTACTGATA ATGGTAATAG CCACCAAAAC TTCTTGATAC TCCCCTTGTG CAGGCATTGT 780 CCTAAGTACT TTGCAGTATT GATTCATATG CTCCTCATAG CGTCCTTGTG TGATGTGTTA 840 TTTCCATTTT GAAGATGAGG AAACTGAGGC ACAAAGGAAG CTGTGCCCAA GGACACTTAA 900 CTAGTAAATG GAGCCAGGAT TCCAACCCAC GCAGTGCGCT TTGGGACTCA ATTTTTAACC 960 ATCTTGCTGT GCTGCCTGTT GAGCATTTTT CACCTGGTGC TTTTGTAGAT CCCACATTAG 1020 GATTTTGTTA GGACCCTGGG CAACCTTGAT TTAGTGAAAG CAGTTGTTGA GAGGTAGAAA 1080 TTCCTGATCC TTTTTTCAAT CTTAAAGGAT TTGCTGAGAC TCTCACTCTT CATTGGTGAT 1140 GGTAACAAGG AGCAGCATGG TGAATGCCAT GTAAAATTCA AGCCTTGCCT TATCTTGGAG 1200 GACTTTATTC CCTTTTCTTT GATGGTACTT TGGAGATTCC AGACTATAAA GGACTCAGCT 1260 GACAGTACAG ACTCTCTTGA TCTGTATTTT CCCAGTATAT GAAATTATTT GTAATGTACC 1320 CGTGAGAACC TGGAATAAAC TGTACTGGCA CTGAAGTAGA ATCTTGGATT TAAAAGTACA 1380 GTGTTCACTG CTGCATCGTT GAGCATTTGC TACACAGAGA ATAACCTTGG AGCAATGTTC 1440 AAAGGTGATG GCATTACCCA GAAACATGGA GTTAGGCCAG GAAACCACAT CTGAAGTTCA 1500 GATTATTGGA GATTGCTGAT TTTTCTTGAC TTTAAATATT TTCGACTGGT TGAGTGTTTG 1560 TTGGTGTTTT TGGGCTAAGT GTTAGCCTTT TGTTCTGTGA TGTCCCTGTG TGAATAAAAT 1620 GGATAATCCC TGTTTCCGGT TAGCTGCTGC TGCTGCTGCT GCTGCCAAGT ATAAGTGAAG 1680 ACTTCCAGCT GCGATTTGCA TTGTGTTTTC AGGCCACCTT TTGAGTTTCC CCATAGCAGA 1740 TATAAAAACT GTTTCTAAGA GTTCATCCTT ACGTGTTCAG CCTTACTTGT ATCCTAAAAC 1800 CACAAACTTG ATTTTGTTCC CATTCATTAT GATCTATATT TGGCATCAGT GAGGCAAGTT 1860 ATTTATATTT ATTATTTATA CCCTGCCCAC TTCCAGAAAT GATTTAATTT GGCCTAGGCA 1920 AGTGTCTTCT GATGGGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGATGAT AATTCTGATG 1980 TGTGTGTGTA TGATGCTACT TCTGCCACTT CAAGAGTCCA GAATCATAAG ATTCCTAATA 2040 GGATTGTTGG GTTGGTGAAT GCTGGGTTTG TTCTCTTCTA TGCCCTCTCT GTCCAGGAGA 2100 AATCTGAGTA TCTTTCTTAG GAATGCCTAA CACTGCTAGA CTGAAAGGTG CCATGTCACC 2160 ATTTTTCCCA AGAAATTTTC TTTTGAGGGT GCTATAGAGA AGCCCTCTGG TATGAATGTA 2220 TTAGGCTGGT GCAAAAGTAA TTGTGGCTTT TGCAATTAAA AGTAATGACA AAACTACAAT 2280 TACTTCTGCA CCAACCTAAT ATATATTATA TATTCCCATT TTGTTCTTTT CAGAATAAAG 2340 CTTCCTAGGA GTTTCTCTAG CTCATGACCT CTTTTACCTT TACTTTCAGT TGCAGTGTTC 2400 TTAGCTCATA GAAGGAGCTT TGACGGCACA TAGAATGAAG TATAACAGCT TCCGTTTGAC 2460 CTGAGGCATC CCTCAGGTAT GAGAATGTCA CCCAGAGATC GAATACAGTG CCAGGTTATC 2520 AACTACCATT TTTTGGGACT GATTCTCTGC TCATGTGTGA CCATTATTTG GGGAAATCAT 2580 ACAGTACCAC AAACCAGAAG TTTCTGAAAA CACCTAAACT CCCCATCTTT CACACTCACC 2640 CATAGGGACC GTGGCCCCCA ATGAGGGGTA GTTCGTCTCT GTATTGGTAG CATTAGCGCA 2700 CGTGCTATAT AGCTCTCTTA ATACCTGAAC TGTGGACAGA CCAGATCCTC ACTGAGCTGA 2760 AGCACATTGG CATATTAAGG GAGCCCAGCA TTGCTGTTTG GCCCTGCTTT TGAACTGGGA 2820 AGATATATTG CTGCATGGAG TTCTGAAAAG TACCTTTGTA AGTCCCGAGA ACTCCTGTTG 2880 ACCTTTGGAT TTAGGTAAAA TGTAAGTCTT AGGAGAATTG ATGAGAATGT AGGAACCAGT 2940 TTTAGCCAAT GCATTAAGAC TAAAATGACT CTATTGTTTG TCAGGCTTTG CCAGAAAGTA 3000 TAGTGAGAGA GAGAGATCCT AAAACTCTGA AAGCAAATAG CCCACAGCAG TTAACTGTAT 3060 TGACTTTGGA AACAGGTTAT AAACCCAAAC CTCTGTGCTG AACTTGAATG GGTGTTTCTT 3120 CTCTCCTTTC TGAGGGTAAA AGCTGCTGGT GAGAACGGCT CTCTGGTGTT GCTAGGACAG 3180 ACCTGTATGA CCTTCTTTAT GTAAATAATT AACAGGGGAA TATTTTCATT TACGTTAAAG 3240 CCATATATGA GAGAGATTTC CGGGCTGGCT CTGACAGCCT CTGGCCCCAC TGGAGAAGGA 3300 AGCCAGCACT GAAAAAATTC AAGCTTCCGG CCACACGGAA CCTGAGAATA TTCTCTATGA 3360 CAGCAGTGGC TGTGAAGCTG TTTCTTTAAA GTAAAACCCC TTTTGAAGGT TAGTCTGGGG 3420 TGACTTTACT GTTACATAGG GAGTAGATTT TGTTTCTTGA TGGTTCGTTG AGTGGTAGAG 3480 AGGTTAAAGG TAGAACTAAC ATATGTAGAA CTAAAAAGCA TCTGAAACTT TTAGCAAACC 3540 AGTAATATTT AGAGGCTTCT GCCCACTCTG GGTAGGCATT TTTATCTTGT ATACCCATAC 3600 CAGCTTTTCA CATCCTGTTT CTTGAGAATA CATAAAGAGC ACATTTCTCC ACATTATCAG 3660 GAAAACAATT TGAAGCACAG GTCTTGTGAA TTGGGAAGAC CACTAGTATT GCCATTAGCT 3720 GCTTATTTGT GTGTGTGTTG GAGGATGGAT TATAATCCAA GTGTATTCAT ATTCTCACAC 3780 TTTAACCAAA AAAAAAAAAA AATCTCCAAA ATCTTCTCTC TTGCATTGTT TATTGATAGA 3840 ATGGGAAACT TACTGCTGGT 3860
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