EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-15860

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr19:47157020-47157890

Target genes

Number: 20
Name	Ensembl ID

CCDC8	ENSG00000169515
AC011484.1	ENSG00000204850
AC011551.1	ENSG00000249210
AC011551.2	ENSG00000230510
CALM3	ENSG00000160014
DACT3	ENSG00000197380
PRKD2	ENSG00000105287
FKRP	ENSG00000181027
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007
NPAS1	ENSG00000130751
TMEM160	ENSG00000130748
ZC3H4	ENSG00000130749
SAE1	ENSG00000142230
BBC3	ENSG00000105327
CCDC9	ENSG00000105321
PRR24	ENSG00000257704
DHX34	ENSG00000134815

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr19:47157029-47157044	TGAACTCCTGACCTC	-	6.22
Zfx	MA0146.2	chr19:47157503-47157517	GAGGCCGAGGCGGG	-	6.01

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_05641	chr19:47156883-47159213	Brain_Cingulate_Gyrus
SE_07554	chr19:47156886-47159276	Brain_Hippocampus_Middle_150

Enhancer Sequence

GGCTGATCTT GAACTCCTGA CCTCAGGTGA TCCACCTGCC TCAGCCTCCC AAAGTGCCGG 60
GATTACAGGC ATGAGCCACT GCGCCCAGCC TCTCCCCGTC TTTGACCTTC TTTCTCAGAT 120
ACGCCCATTG CCCCTTATCA CCAAGAGAAG GTCCTTTTGT GAGTCTTCCT TAAGTCCTTC 180
CTGCTGCAGA TTGCCTCTTT CCCCCATATG GGTAAAATAG GCTGACCACG ACTCATAAAC 240
GTCTTTGCTC TCCCTTCAGA AAGAACCTCC CAAGCCTCCT AGACAGTCCT GTGAGTCTAG 300
CCTTACTGGT ACTGCAGCAG CCATCCCAGC ACGTTCCTTT GCCCTAGAGA CCACATCCTC 360
CTTCTGCCTT TGGTCCACTC CCACCAGGAA GCTCCAGTGA GTCTACCTTT CCTCATCGCC 420
ATGAGAAATT TCGGGGAGTC AGGCCGGGCG CAGTGGCTCA CGCCTGTAAT CCCAGCATTT 480
TGGGAGGCCG AGGCGGGCGG ATCACATGAG GTCAGGAGTT GGAACCAGCC TGGCCAATAT 540
GGTGAAACCT TGTCTCCCTT AAAAATACAA AAACTAGCGG GGCGTGGTGG TTTGCGCCTG 600
TAGTCCCAGC TACTAGAGAG GCTGAGGCGG GAGGATTGCT TGAGCCCAGG AGGCAGAGGT 660
TGCAGTGAGC CGAGATCACA CCATTGCACT CCAGCCTAAG CAACACAGCA AGACTGACAA 720
AAAAAAAAAA AAAGGAAAAA AGAAAAAGAA ATTTCCATGA GTCTACCCTG GATCCTTCTT 780
GCTGCAGGAA AAGAGCACTT CTCACGGATG GGGTCTCCAA GACATTAGGA CTTAATCTCA 840
TTTTAGAAAA GAGAGGGTCA GAGCCAGAAA 870