Tag | Content |
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EnhancerAtlas ID | HS133-15238 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr19:18133990-18135450 |
Target genes | Number: 30 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr19:18134064-18134079 | TGAACTCCTGACCTC | - | 6.22 | REST | MA0138.2 | chr19:18134495-18134516 | GACCCTGGCCATGGTGCTTAG | - | 6.57 | ZNF263 | MA0528.1 | chr19:18135313-18135334 | TATCCTTCCACCTCATCCTCC | - | 6 |
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| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18134051-18134890 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18134083-18135538 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18134027-18135598 | Right_Atrium | SE_50498 | chr19:18134019-18135509 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18134074-18135718 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18133825-18135230 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | TGCCTGCCAC CACGCCCGGC TAATTTTTGT ATTTTAATAG AGACGGGGTT TCACCATGTT 60 GGCCACGCTG GTCTTGAACT CCTGACCTCA AGTGAGCTGC CCGCCTCAGC CTCCCAAAGT 120 GCTGGGATTA CAGACGTGAG CCACCGTGCC CGGTTTAAAT GTGTTTATTT GTCTCTGTGC 180 TCAATTCTCC CACCTACAAG CCCCCTAAGG GCAGGACCGG GTTTGCTTTG TTGGTGGCCA 240 GCAGTTGTCC ATTAATGTTT GTGATACAGG TGAACCAGGC CACGTGAAGC CTTGAACCGG 300 GGCTGAGAGC CAGCGCTTTC TTTTGGGGAC ACAAAACAGG CAGGATGGGC AGGGGGTGGT 360 GAATAGAAAA GATTGGGTAC ATAAGGCAGA AGAGCCTGGG GCTTTATAGG GGTGGCCCCT 420 GAAGCCTGTG ACCCAGGAGG GACCAGGCCC AGGCCACAGT CCAGGCAGGA GAGGGCGTGT 480 CCCCATCTGT GAACCCCCAC CCCCAGACCC TGGCCATGGT GCTTAGGAGG GAGGCAGCAT 540 GGAGCTTCGG GTCTGGGCTC TGGGACCACC TCTTCCTCCC TGTGTGACCG TGGGCAAACG 600 ACAGCACCCC TCTGAGCCTC AGTTTCCTCA TCTGGAGCTT GACTTCACTG TACGTCAGTG 660 TCAGGACTGG GCACAGAGTG GGTGCAGCGT CTGTGGGGCA GCATGGGGGT GCTGAGGCAG 720 TGGGTGAGGG GTAGGCTCGT CTGGAACATG CCGTTAGCAG TTCCCAGCCT CTTTGAAAAC 780 AGGAAACCGG CTCTCATGGG AGCCCCCAGC TGTGCTTCCT GAGTCTCCGC GTGACGTGCG 840 CGTGCTGGGG CAGTGTGGGC AGGCATGTGT GTGTTTGCGT GTTTGCAGGC GGCCTGGAAT 900 ATAGGTGGAT CCGCCTGCGT GTGCATATGT GTGTGTGTGT GTGTGTGTGT CGGGCCGCAC 960 GTGGCATTGC CCAGAGGCAT GTACACACAC AACCGTTACC TGTGCTCGCA TGTGGAGCTA 1020 TGGATCTCAG CCAGTGTGGG AAGCAGACAG TGGGTTGGTT GGGGCACTTT TGAGTCTGGG 1080 TCTAAGTGTT AAGTCTGTGT GTCCGTCAGC AGAGGTGACT GGTGTGTGCT GGGACTGACT 1140 TGGGCCGGCA GAGCCTGTAT CGTGGCCCTA AGGCCTCCGA AACCCCAGGT CAGCCCTGAT 1200 TCAGCTGCTG ATGTTGGCTT TATTTATTTA TTTATTTTGA GACAGGGTAT TGCTGTGTTG 1260 TCCAGGCTGG AGTGCAGTGG TGCCCTGTTA GCCCACTGTG GTCTCGACCT CCTAGGCTCA 1320 AGCTATCCTT CCACCTCATC CTCCTGAGTA GCTGGGACAA CAGACACACA CCACCACACC 1380 CAGCTAATTT TTGTATTTTT TGTAGACATG GAATCTTACT ACGTTGCCCA GGCTGGTCTC 1440 CAACTCCTGA ACTCAAGCGA 1460
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