EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-14691

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr19:3699010-3700290

Target genes

Number: 27
Name	Ensembl ID

ZNF555	ENSG00000186300
ZNF57	ENSG00000171970
ZNF77	ENSG00000175691
TLE6	ENSG00000104953
AES	ENSG00000104964
GNA11	ENSG00000088256
NCLN	ENSG00000125912
CELF5	ENSG00000161082
NFIC	ENSG00000141905
DOHH	ENSG00000129932
FZR1	ENSG00000105325
C19orf71	ENSG00000183397
MFSD12	ENSG00000161091
HMG20B	ENSG00000064961
GIPC3	ENSG00000179855
TBXA2R	ENSG00000006638
PIP5K1C	ENSG00000186111
TJP3	ENSG00000105289
APBA3	ENSG00000011132
MRPL54	ENSG00000183617
ATCAY	ENSG00000167654
DAPK3	ENSG00000167657
EEF2	ENSG00000167658
PIAS4	ENSG00000105229
ZBTB7A	ENSG00000178951
MAP2K2	ENSG00000126934
CCDC94	ENSG00000105248

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr19:3700159-3700169	GCCCCGCCCC	+	6.02
RREB1	MA0073.1	chr19:3699324-3699344	AGGCGGGGGGTGGGGGGGGG	-	6.72

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_27002	chr19:3697121-3700666	Esophagus
SE_31937	chr19:3698017-3700680	Gastric
SE_54699	chr19:3696700-3700550	Stomach_Smooth_Muscle

Enhancer Sequence

CGGTGCTCCC AGAGCCCCTG ATAAGATGAA TGGTCGCGGT GTGGTTTTCT TTTGGTCAGC 60
GAGTCCTGGG CTACTTTGTC TCTGACCAGC TGGGGTCAGA GGGCTGACAG CGGAAGTTGG 120
GGGGCCCAAG AAAGGAACCC GGGCTGGGGC CTGGTGCCCT GCCTGGGTTC CTCCACCATG 180
TCTCTTGCTG GCCAGGCCAG GACACCGGCT GCCCGCAAAG AAAGGGGCGA GGCCACTGGC 240
TCTGGGGAAG GAACCGGGTC ACCTACCAAG CGGTTCCAGA TGGCCGCCGG GAGGGAAGCC 300
ACGAGTGTCT TTCAAGGCGG GGGGTGGGGG GGGGACTTGA TGACTTCCAC ACTCTCTCTC 360
TCTCCAGACA TCTCCCCAAC TCCCAGGCAG CACGCATCGC CCGCCCGCCC GCTTGCCCGC 420
CTGCCAACCA AGGAAGCTTC GGGAGGCCTG GGGGGAGAAG GAGGACGGAT GCCCGTGTGG 480
GTGTCTACAG AGACGCTGCT GCTGGCTGCC TGGGAGGAGC AGAGGATTTT GTGAATCCGG 540
AAACTTCCGA TTTGGGAGCT TGTGACCTCG ACTGAGAAGG AACTGTTCCC TTCCTCTGGG 600
CTCTGCACAC CGTCCCCACA GAAGGGAAGG CCCAGCTGCC GCCACCTACC CGGCTGGAGG 660
TCCAGGAAGC AGCTAAAGGG GGCATGAGAC AGCCGTGCCC CCCGCCCAGC CCGCAGCCCC 720
ACCAGTGTGT CCTGGGGGAA GGCTCGGGGA GAGGAAAAGG GGGCGACAGG GCACCCTGTG 780
TGCACAGCCG GGGCGGTGGA GGCATCTTGA GATGTAACCC TTTTCCTCCC CTCATTTTAG 840
CAGGGAGGTA AACTGAGGCC CAGGAAGGTG AGGAAAGGTC GCGCACCCGG ACTCAGGTCT 900
GGGGACTTAC AGAAAGGGAG GTGACATCAG GAGGTGGGCA CGCACGGCCT CAGAGACCCC 960
CGCCTCCACC CAAGCAGCCG CCACTCACAC GACGGGCAGC CCCTGGGAGC GGGTCAGGCA 1020
GAACGGGGAT CCCCAGCGGC GCCCACGCCG AGTCGCCCCC GGCCCGGGAG CGGTGGGAGG 1080
TAGCCCCTCG CAGGCCTCCC GCTTCCCGGC GCGGCTTCAG CCCCGTCCTC CCCGCGGCTC 1140
CAGGGGACTG CCCCGCCCCA GGCTCCTGGA ACCGGCGGCG CCCCCGCAGC GACCGTGCAG 1200
CCCCCGCCCC GGCCCCGCAG CCCCGCGACT CTCGGCGCTC GGACGAGCCC AGCGGGCCGC 1260
AGCCCCGGGA GGCCGGGCCG 1280