Tag | Content |
---|
EnhancerAtlas ID | HS133-14047 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr18:12287130-12288630 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EGR1 | MA0162.3 | chr18:12288089-12288103 | CATGCGTGGGCGTG | - | 6.67 | EGR2 | MA0472.2 | chr18:12288091-12288102 | TGCGTGGGCGT | - | 6.62 | EGR3 | MA0732.1 | chr18:12288089-12288104 | CATGCGTGGGCGTGA | - | 6.73 | EGR4 | MA0733.1 | chr18:12288088-12288104 | CCATGCGTGGGCGTGA | - | 6.58 | KLF5 | MA0599.1 | chr18:12288254-12288264 | GGGGCGGGGC | - | 6.02 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_00577 | chr18:12287729-12290533 | Adipose_Nuclei | SE_30503 | chr18:12286759-12289528 | Fetal_Muscle | SE_36424 | chr18:12286635-12289541 | HMEC | SE_37132 | chr18:12285952-12291067 | HSMMtube | SE_44269 | chr18:12287427-12289464 | NHDF-Ad | SE_45483 | chr18:12287160-12289216 | NHLF | SE_46568 | chr18:12287350-12289494 | Osteoblasts | SE_52119 | chr18:12287285-12290326 | Skeletal_Muscle_Myoblast | SE_54874 | chr18:12286884-12289600 | Stomach_Smooth_Muscle | SE_63893 | chr18:12287251-12290340 | HSMM |
|
Enhancer Sequence | AAGCCCTTCC TTTAACCACA GCTCTGGAGA CTGTCACTTG GACGACCAGG GCTGCCAGGG 60 TTTCCGGAGG GCACGGCCTC CTGACTGCTC AGGGCTTCCT CAAGGTGAGC TCAAGACCCG 120 CAGGGCTTCC CTATGGCAAG CCGTCGAGGC TTTCTTTGGA TGCAGGTGGC CGCAGAGCGC 180 TCATGCGGCG TCGGTGCTGG CAGCCAGGTG AGCTGCGCCA GCTCAGCCCG AATGAGCGGT 240 GTCAGGCTAT GCACCGTGCT CCCGCCCGCC CTGCGCCCAG ACCTCCGCCT GCCCTGGAGG 300 TGAAGGACGC GGGCTCCCCA CGCTCCCCCG AGTGATGGTG CAGAGGCGTA CTCCCTCTCG 360 GGGTCCCCAC TCCACATTCC GGCGTCCTCG GAACAGCCGG CACAGGCAGG GCGGGCGTCA 420 GCTGTCCGGT CGCACCTCCC TGCAGGGGCA TTCCTTGGCC TGCTGCTGCC TGCCAGGCTG 480 ACCCAGGCGC AGGCGCTCAG GTAAAGGCAG TGGCCAGCCC AAGCTGCCGA CCCAGCCGCT 540 CCTCCCAGCA GAGGCCAGGT GAGGAGGCGA GGATGGTGGG GGTCGCCCAG GGAGAAAAAT 600 CTCATCCGAC AAGGAAAGCC TGGTGACCCC CTGTCTGCCT GGGCAGAACT CCCCTCCCAG 660 GAATGAGCTT TGGACAACGT GGTTCCTCCC GTTGAATCAG GTTCTGACCG AGTCCGCTGC 720 AGCTGCAGGC GGGGGCGCCC TGCCGAGCAG ATACCCAGCG GAGCTCCGGG GCCCCGTTTC 780 TACTGTAAGC AGCTGGGGGC CAAATGTGCG CCCGGGCACG TCTCTTGGCC TCTCCCAGAC 840 TCGGCACCCT CATCTGTAAG AACGTGAACG ATGTCCGCCC TGGACAGGAC TGCGGTCGCG 900 AGAGGTGCCC GGGCCAGGCA AGGGACACAG CGCGGATCTG CTGGTTTCCC CCTTGATTCC 960 ATGCGTGGGC GTGAAGCGTA TTCTTGGGAG TCAGGCACAA ATGTGACTTA GTAAGGAAGG 1020 GTGAGCGTTG CTGGGATGGG TGGGGAAAAA TGTTTTCTGC ATCACGGGGC CAGCTGGAGC 1080 GGGGAGTGGC CACCGCAGGA TTCCTGGGTG CAGCTGAGAC AGCTGGGGCG GGGCGTGCTG 1140 GGCTCACACT GAGTTCAACT CTCCAAATAG CCCTCGCGCC ACTGTCCAGA ACAGACGATA 1200 AGAATTTCAC AGGACTTTCG TCTGGAAGTT TGCGGTTGAC AATGCGTTTT TACCTACATG 1260 ATCACAGTAA CTTTCCCAGC AAGGCTGTTA GCTAAAGAAG GTGCCCTCCC CGCCCTGGAG 1320 CCTGAGAGAG GACGAGCTGC AGCCTTGTCC AAGAGAAAGG CCCGGGGGAC CCAGCCATCC 1380 ACCTCCCTGC CCACCACCAC CCTTCCTTCC AAGGAGCACG CAAGACCAAG CCTAGGACTC 1440 GCTACAAAGC TCGGTTCCTA ACTAGACCGG CGGGGACTGA CTAGGAATGG AATCCAGGCA 1500
|