Tag | Content |
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EnhancerAtlas ID | HS133-13360 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr17:74247550-74249740 |
Target genes | Number: 27 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Hnf4a | MA0114.3 | chr17:74247841-74247857 | AGGTTCAAAGTCCTAC | + | 6.19 | IRF1 | MA0050.2 | chr17:74248745-74248766 | ATTTTCTCTCTCTTTCACTTT | + | 6.21 | IRF1 | MA0050.2 | chr17:74248751-74248772 | TCTCTCTTTCACTTTTTTTTT | + | 7.63 | ZNF263 | MA0528.1 | chr17:74248049-74248070 | CTTTCTTCCTTTTCCTCCTCA | - | 7.04 |
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| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_11415 | chr17:74247580-74249549 | CD20 | SE_15056 | chr17:74247576-74249126 | CD4_Memory_Primary_7pool | SE_15056 | chr17:74249138-74250044 | CD4_Memory_Primary_7pool | SE_18937 | chr17:74247402-74249906 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19565 | chr17:74247575-74249815 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21340 | chr17:74248712-74249921 | CD8_Memory_7pool | SE_23599 | chr17:74247703-74248615 | Colon_Crypt_1 | SE_24131 | chr17:74247750-74248058 | Colon_Crypt_2 | SE_24131 | chr17:74248072-74248530 | Colon_Crypt_2 | SE_27367 | chr17:74247623-74248919 | Esophagus | SE_28090 | chr17:74247720-74249008 | Fetal_Intestine | SE_29152 | chr17:74247624-74248997 | Fetal_Intestine_Large | SE_31864 | chr17:74247673-74248817 | Gastric | SE_31864 | chr17:74249094-74249622 | Gastric | SE_32663 | chr17:74247575-74249525 | GM12878 | SE_43246 | chr17:74247582-74249663 | Lung | SE_47749 | chr17:74247791-74248535 | Pancreas | SE_48284 | chr17:74246270-74250806 | Psoas_Muscle | SE_50371 | chr17:74247468-74249790 | Sigmoid_Colon | SE_52552 | chr17:74247474-74249789 | Small_Intestine | SE_53757 | chr17:74247335-74249794 | Spleen | SE_55588 | chr17:74247785-74248788 | Thymus | SE_60322 | chr17:74239092-74270751 | Ly4 | SE_60510 | chr17:74247565-74275632 | DHL6 | SE_62440 | chr17:74241844-74272934 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 74249079 | 74249712 | chr17 | 74247567 | 74249035 | chr17 | 74248222 | 74248574 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I076250 | chr17 | 74246726 | 74249804 |
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Enhancer Sequence | AAAGTGCTGG GATTATAGGC GTGAACCACC GAGCCCAGCC AAGAATAGTC ATTTTTGAGC 60 AATGACTCTG TCCAAGCACT TTGGAATGCG TTGTCACCCG AGCTGGAGTG CAGTGGTGTG 120 ATCACAGTTC ACTGCAGTCT CAACCTCCTG GGCTCAAGCG ATCCTCCCAC CTGAGCCTCA 180 TTTAATCTTC AAAACAACCC TAAGAGATAA GTATTATTGT TCCCACTTCC CAGATGAGGA 240 AACTGGAACT CAAGTAGGCA CAGGGAGCAG GAACTGGCCC CAGGTTCTTC CAGGTTCAAA 300 GTCCTACATT TTACCCATGG ATCATCATCT CACCAGCCTC TGTGGGGAAA GCCTGCCTGG 360 GTGCCAGCCC TACTGCCCAC CAAGCTAGCG GAGTGATTCT CCCAGGGTGG TGCCAGTGAC 420 AAAGGGCAAT GCATGGGGAC GTCTCCATCA TTGTCACACC ACCACCTCCA CCTTCACTGT 480 GCCTCTCTCT AGGTTTAATC TTTCTTCCTT TTCCTCCTCA CTTCCCTCTG TATTATCAAT 540 CTCCTTCCTG TATCGGGACT ATTTCCTCAA CAGGCCCGGG GAAGCTCTTG TCTATGGAAG 600 TCCTCTTTGG CCTTAAGCTT CCCTCTAAGA GCTCCAGCAG ATGAGTAACC TGTCCTCCTG 660 CAAACACTGC CATGAAGTGC GTAGGCAGCT GCCTGCCTTC AGGGCTGGAT GGACACCCTG 720 TTTCCTTGCT CAATCCCTTC TGATGACTGG ACTCTGTACA CAGTGTGGTC AGTGGGTCAG 780 CTCTGATCTG GAAGCTCCCA AAGGCAGGAC ACAAGATTTT CTCTGACTGT TCCCAGGCCC 840 CAGGGCGTGT TGGGCACGGG AGCGTGTGGC ACGGATGTTG TTCGTGATGA GGCATATTCT 900 AGTGGTTTCC CAATTCGGTT GTGTACAACC CAGTGCTCTA GTGTTCAGTA AATACTTCCT 960 TCCTCTTTAG GCAGAACACT GGCTCTGTGT TTTATTAACA GCACCTCATG CCTGGCCCAA 1020 AGAATGATTT GTGTGGCTTG GGCTGTTGGG GTCAGAAATG GCATTCATTC ATCATTCACT 1080 CTGGAGGTGC TGTGTTTCTG AAGGAGAAGG GGACCTATCC TGGCAAACAA ATCAGGGGCT 1140 TTATGGTAAA CAAACTCCTC TCTTCCCAGC ACTTGTTTCT TGCTCTCTGT TTTTGATTTT 1200 CTCTCTCTTT CACTTTTTTT TTTTTTTCAC TATACCCGGG CTTCCTGAGT TCCTGACAAT 1260 TTCTAAAGCC TCAAGCATGA TCTCATCAGA AACTCTGGCT TCTTTTAACA TTTCTTTCCC 1320 TTCTGCTGAG TCCTAGTCCA TTTAAATTTC CTCTGTGACT CTGGGAATTT TTTTTCCTTG 1380 AGACACAGTC TCGCTCTTGT TGCCCAGGCT GGAAGTGCAA TGGGCTGATC TCAGCTCACT 1440 GCAATCTCTG CCTCCCAAGT TAAAGCGATT CTCCTGCCTC AGTCTCCCAA GTAGCTGGGA 1500 CTACAGGCAT GCACCACCAT GCCCGGCTGA TTTTGTATTT TTAACAGAGA CGGGGTTTCA 1560 CCATATTGGT CAGACTGACC TCAAACTCCT GACCTCAAAT GATCCGCCCA CCTCGGCCTC 1620 CCAAAGTGCT GAGATTACAG GCGTGAGCCA CCGCGCCCAG CCGGACTCTG GGATTTAAAG 1680 ATAACCAAGT GAAAATAGGT TCATCCTCTT TGACTCACAG CCTGGCTGCC TGTGGAGGCA 1740 ATGAGGAGCT GACATTCACC TGACCCCCGT CCTCTACTTT CGGGTATGCA GAGGCTCTCT 1800 TTTGCTGCCC GCGTCAAGTT AGAAGAGGCC ACATGATTCT TCGGGACAGT GAACCATGAA 1860 CAAAGGTGTA CTGCAGTCAT GTGTTGCTTA AAGACCCGTA TACGCTCCGA GAAATGCGTC 1920 ATTAGGCGAT TCTGTCGTCG TGTGAACATT CTAGAGTGTA CTCACACACA CCTAAATGGG 1980 CTAGCCTACC ACACACCTAG GCCATGTGGC ATAGCCATTG CTCCCAGGCT ACAAACCTAT 2040 CCAGCATGTT ACTATACTAA ATACTGTAGG GAATTGTAGC ACAGTGGTGA AGTATTTGTC 2100 CATCTAAACA TAGAAAAGCA CTTTGGGAGG CCAAGGCGGG CAGATGACTT GAGGTCAGGA 2160 ATTTGAGACC AGCCTGGCTA ACATGGTGAA 2190
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