| Tag | Content |
|---|
EnhancerAtlas ID | HS133-12914 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr17:55535810-55537320 |
Target genes | | Number: 12 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NR2F1 | MA0017.2 | chr17:55536828-55536841 | CTTTTGACCTCTG | - | 6.59 | | Nr2f6(var.2) | MA0728.1 | chr17:55536824-55536839 | TGAACTTTTGACCTC | - | 7.82 | | RARA | MA0729.1 | chr17:55536821-55536839 | CCCTGAACTTTTGACCTC | - | 8.15 | | SOX10 | MA0442.2 | chr17:55536628-55536639 | TGCTTTGTTTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_00994 | chr17:55536107-55536570 | Adrenal_Gland | | SE_13320 | chr17:55535786-55537247 | CD34_Primary_RO01536 | | SE_14089 | chr17:55536054-55537251 | CD34_Primary_RO01549 | | SE_25325 | chr17:55535436-55537252 | DND41 | | SE_32626 | chr17:55535627-55544606 | GM12878 | | SE_37060 | chr17:55535926-55537342 | HSMMtube | | SE_39369 | chr17:55535721-55537114 | Jurkat | | SE_49837 | chr17:55535667-55537180 | RPMI-8402 | | SE_51818 | chr17:55535739-55537363 | Skeletal_Muscle_Myoblast | | SE_58289 | chr17:55477220-55639691 | Ly1 | | SE_61477 | chr17:55513374-55564799 | Toledo | | SE_63602 | chr17:55535742-55537177 | HSMM | | SE_66267 | chr17:55535721-55537114 | Jurkat |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I057458 | chr17 | 55535761 | 55537260 |
|
Enhancer Sequence | CATCAGAGAT TTAGGTCACA GTGTTACCAT GCTTTAGTCA GAAGGAAAGA ACTCTGGGTC 60
ACTGTGCAAT TTCTGGTTGG CTTTTGGAAG CTGACAGCCT CATTGCTGAT ATCTTCTTCA 120
GGAGCACAAA GTCTCTGACT GGGAACTGCT GGCTACATGG ATGGAGAGCC CCTCTCCAGC 180
TCTAATACTC TCTGTGTTCC ATGCCTCTGG GTTATCAGCA AGAAGCCCAG CTGCTCGGCC 240
CATAACTCAG ATCAGTTAGC ATATAAACTC CAGAAAATAA TTGCCCTCTT AATTGCTACT 300
GATACCATGT CTTGAACCAG GCTTTGTTCA AGGTGGGATA CAGGTGGGAC ACAGGCTTGG 360
TTCACAGGTG GGAGGGTGCC CTGTGCAGGC CGTGGGAGGA TAATTTGAGA ATTCCCTTGC 420
CTGTCCCTGC TCCGCGGTTG CTGGGCACCT GGCGAGAGCG TTGGGTTGTT TGCTTTGGGT 480
AACTATGGCA GATCCTTTTA ATTGCCACCA AATAACTTCA GCTCAACCTC GTCAGTGGTT 540
GTTTTGCTGC GTCGCTCGGA AGAATGCCTC CCTCTTTGTA AGAGCTGGAT GGATGGGAGC 600
TTGGCAGAGG CAGGCCAATG CTCTTTAATG TTTTCCTTCC CATTTAATAA GTGTTGAGTA 660
AAACTTGAGT TTAGGGTGTT TATGTGGCAC AAAAGGTAAA CCATTTGTGG TGTTTTGGAA 720
CCTGGGCTAA GTGTTTCTCA CACACATCCT CATGACATGG TAATGACTAC CTTTGTGTTA 780
AACTTGGGTC ACTGTCAACT TTCTTCTGAA GTGCTCCCTG CTTTGTTTTG GGGGCAGGGG 840
TGGGAAAGGA ATGAGGTGAG AGAAGGTGAG GTGAACATGG GATGCCGCAC GGGGGCATTG 900
TCCTCAGTCG GACTTTCTAG AAAAAGGCAT CACGCGGCCT GGAGACAGGA AGGGAGAGAT 960
TTTAATCATC TGCTGTGGCT TTTGCTCTTC TGACATCAGA ATGGTAGGAG GCCCTGAACT 1020
TTTGACCTCT GGCTCCAGGT CCATAAATGT CCCGAGGTTC CCAGGAAAAG GAAGACTTGT 1080
TAGATGGGAA CCCTGATGTT TGATTAGAGC AGCTTTTAGT CACTACTGTC ATGTGTTTGT 1140
TTATTCAGGC ACCAGTTGCA TCTGAGTAGT GGTAGGTCCT GGAGACAGGA GGCACAGCCT 1200
TTACTCATGG CCTCATGGTA AGGTAGAGTC ATGCAGAACA TTTAACGAAA GTATGGCTTG 1260
GCCGGGTGTG GTGGTGACTC ACGCCTCTAA TCCTAGCACT TTAGGAGGCT GAGGCAGGAG 1320
GATTGTTTGA GCCCAGGAAT TCAAGACCAG CCTGGGCAAC ATAGCAAGAC TTCATCTCTA 1380
CAAAAAATTA AAAAATTAGC CGGGCACGGT GGCTCACACC TGTAATCTCA GCACTTTGGA 1440
AGGCTGAGGC GGGCAGATCA CCTGAGGTCA GGAGTTCGAG ACCAGCCTGG CCGACATTGT 1500
GAAACCCCGT 1510
|
