| Tag | Content |
|---|
EnhancerAtlas ID | HS133-12891 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr17:54989180-54990750 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr17:54990049-54990066 | AGGTCAGGCTAAGTTCA | + | 6.46 | | RREB1 | MA0073.1 | chr17:54989633-54989653 | CCCCAAACCACCTAAAAACA | + | 6.72 | | SREBF1 | MA0595.1 | chr17:54989204-54989214 | ATCACCCCAC | + | 6.02 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_09776 | chr17:54983127-54995435 | CD14 | | SE_23357 | chr17:54988943-54994138 | Colon_Crypt_1 | | SE_24299 | chr17:54989362-54993700 | Colon_Crypt_2 | | SE_50987 | chr17:54989238-54994158 | Sigmoid_Colon | | SE_53905 | chr17:54988832-54994759 | Spleen | | SE_64940 | chr17:54989113-54995118 | NHEK |
|
Enhancer Sequence | AGTTTGAGAT TACAGTGAGC TATGATCACC CCACTGTACT CCAGCCTGGG TGACAGAGTA 60
AGATCCTGTC TCTAAAAGAA GAAAAAAAAA AGCCAAGTTT AGAGCCAGGC ACGGTGGCAC 120
ACCTGTAGTC CCAGCTACTC AGGAGGCTGA GATGGGAGGA TCCCTTGAGG CCGGAAGTTC 180
AAGAACATCC TAGGCAACAT AGCAAGACCC TGTCTCTAAA AGAAAAGAAA AAAAAAGCCA 240
AGTTTATATG CTACACAAAG CTGGATGCAG ACCCCCAACT CTGACCTTGC TCAGGCTACT 300
GTCTCCTCTG ACAACACGAA GACGGGTCTT GTTCTCCCTG AAGGTGCTGT GAGAATGAAA 360
TGAAATCAGG CCATGCTTTG GATCTTAGGC TGATGTAACA AAAGGTGGTT TGATTTCAGC 420
CTCTGCTTTG AGGCCACAAG GGGAAGGTAT GATCCCCAAA CCACCTAAAA ACATTGCAGA 480
CCTGAAAGGC CCTTAGGAAT CCACCTAGTC CCACAGCCTC ACTATACTGG TGAGGACCCA 540
GGTCCAGGGG CCAAACCCCA TGCTCAAAGT CACACGGCCA GGACGGAGGA CACTATGGTG 600
CAAGAGTGTT GGCTCTCCCT GTGGCTCTGA TCCAGTGATT ACTGGGACGC TGCCCACCCT 660
CCCTCTTAGG CCTCTAATAA CAACCCTTCC TGATCACAGG AACTCTCCGG CCCACCAAAG 720
GCTTTTGCTT ACATGACCTC AAGCTTCCTG GACTGTTTGG TGCTCCGGAC TCTACGGACC 780
TGGATACGAG GCTGGTCCAT GGGAAGAAAT GCAAACTATG AAATCGAACC AACCCGGGTC 840
ACAATGCCTG CGTGGCTATT TACTGCATTA GGTCAGGCTA AGTTCATTTC TCTGGACCTC 900
AGTATCCTCA ACAGTAAAAT GAAACTAAAT CATATCCACC TCCTGGGTGC CACCAGGACT 960
TCGTGAGGGA ACAGAGGTAA CCTCCAACGT TCATAGTTGA CATTCAAAAC CCTCTACTAA 1020
ACACCATCAG ATGGTGGGGC GCAGTGGTGC ACGCCTTTAA AGACCTCCTA GCACTTTAGG 1080
AGGTCGAGGT GGGCAGATCG CTTGAGCTCA GGAATTCGAG ACCAGCCTGG GCAACATGGC 1140
GAAACCTCAT CTCTACAAAA AATTAGCGAG CCTGTGGTCC CAGCTACTTG GGAGGCTGTG 1200
GTCCCAGCTA CTCTTGAGGC TGAGGTAGGA GGATCCCTTA AGCCCGGGAA GTCGAGGCTG 1260
CAGTGAGCTG TGATTCCGCC ACTGCACTCC AGCTTGGGTG AGAGGGACGA GACCCTGTCT 1320
CAAAAAAATA AAAATAAACA CCATCAGACA ATGACAGGAT TATGGCAAGC AACCTAACCT 1380
GTCTTCATGG ATGATGGGAA GGGACTATAT AATCTCCCAT CCCCTTTCTA CTCTGACATT 1440
GGAGATGCCC CGGCCTCGAA TTCAGGCCCA TCTCCCCAGG GCGTCCAGAG TGTGGCAGAG 1500
AGGCCCCCGG TGGCCCCTCT GCACCACCCA TCAGGCCAGG CTGCCCTCTG CACCCAGCAG 1560
GCCGTTCCCT 1570
|
