Tag | Content |
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EnhancerAtlas ID | HS133-12872 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr17:49030960-49033360 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr17:49031054-49031075 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | Myod1 | MA0499.1 | chr17:49031795-49031808 | TGCAGCTGTTCCT | + | 7.34 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | + | 6.37 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | - | 6.54 | Zfx | MA0146.2 | chr17:49032768-49032782 | GAGGCCGAGGCGGC | - | 6.02 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_00952 | chr17:49030867-49035094 | Adrenal_Gland | SE_02991 | chr17:49032474-49033379 | Bladder | SE_04178 | chr17:49031015-49032189 | Brain_Anterior_Caudate | SE_05235 | chr17:49030956-49032312 | Brain_Cingulate_Gyrus | SE_06067 | chr17:49030165-49035186 | Brain_Hippocampus_Middle | SE_23191 | chr17:49031126-49031896 | Colon_Crypt_1 | SE_23784 | chr17:49031665-49031984 | Colon_Crypt_2 | SE_26011 | chr17:49032143-49033783 | Duodenum_Smooth_Muscle | SE_26691 | chr17:49030919-49033447 | Esophagus | SE_29967 | chr17:49030933-49033704 | Fetal_Muscle | SE_37666 | chr17:49025326-49036503 | HSMMtube | SE_47468 | chr17:49031102-49031460 | Pancreas | SE_47468 | chr17:49032629-49033381 | Pancreas | SE_48151 | chr17:49023159-49034340 | Psoas_Muscle | SE_49193 | chr17:49032258-49033530 | Right_Atrium | SE_51156 | chr17:49018220-49035057 | Skeletal_Muscle | SE_54412 | chr17:49030869-49034362 | Spleen | SE_54634 | chr17:49031082-49034752 | Stomach_Smooth_Muscle | SE_57824 | chr17:49030927-49033111 | VACO_503 | SE_59738 | chr17:48979175-49044314 | Ly4 | SE_65373 | chr17:49030870-49033427 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 49032200 | 49032260 | chr17 | 49031200 | 49032200 | chr17 | 49031092 | 49031200 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I050953 | chr17 | 49030850 | 49033890 |
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Enhancer Sequence | CTCCAGCCTG GGAGGTTGAG GCTGCAGTGA ACTATGATTG TGTCACTGCA CTCCAGCCTG 60 GGCGACAGAG GGGAGACCCT GTCCCAAGAA ACAAAAAAAA AAAAAGAAAG AAAGAAAGAA 120 AGAAAGAAAA AGTGGGCTCT GGAAGGAGCC AGCCACCGTT GCCCTCTGGG CACTCACCAT 180 CTCACCCCTC AGGCTCCAAC AGGGTTCCAC GTGACCAATC CCCGAGGGGA GAGGAGACTG 240 CGGAGAGGAT GGGAGGCAAA GCACCTCCTT CAAGCTCCAG GGAGGCAGGA GGATTTGTTT 300 AGGAGTGGCC CTGTGCAGAG GTAGGGGCAT GGCTGAGAAC ACCTTGGGAG GTGGTGTGAA 360 GCTGAGTCCA GGAGCCGCCA GCCCTCCCTG CCACTCAGCT CAGGGGTCAC TTGGGTAGCT 420 TCAGCCTCAA CAGCCGTGGA GTCAAGTGTC TCCTCTACAA AAATAATTCC CAAATAAGTC 480 ACTGCCTTCA CCCCTGGGAC TGGCTGGTGC ACCCAAATTG GAGTCGCCAC CCAGCCCCCT 540 TGAGCATTGC CTTGCTGGCT GATCCAACAG AGGCAGAATT AGCTGATGAG GCTACCACAG 600 CGGGAGGGAA CTGACCTGAG GCCGCCTGGA GAGATGGGAC CCCGAGGGCC CTTTCTGGCA 660 CTACTCACTT GTTGGGTCTG GGGAATTAAA ACACACTCCC CCTCTCTGGG TCTCAGTTTA 720 ACAGGGAGGA GACCACCACC TTCCAAACCT CAGTGACGGC ATCAGGCTGG GGGTGGTGCT 780 GGGCCTCCTG CGTCTGTGTC TGGAGACGCA GCTGACTCCC TGACAAGCCC AGACATGCAG 840 CTGTTCCTGC AGAGGAAGCA GCAGGAACTG GGGAAGGGCA GAGCGCTGAG GGAGGGGCAA 900 GAGGGATGCA AGGACACCAC AGTGACCGCG TGCAGCGAAG CGAGTATGAG CAGAGTCCCA 960 ATCTCCAGGT CCCCTCTCCG CGGAAGCACT TTTGTCTTTA TTGGAAATTT CCTCCCATGT 1020 AACATCTGAC CTCTACCTTC TCTTCTACAG ATGAGCTCTG CTGTGAGTCC CAGCGGGCTG 1080 AGACACTGTG ACTGCCCACC TGTCCCCAGG TGCCCCTTCT ATACAGCCCC ATCCCTTCCC 1140 AGGGATGCTC AGTGGCTGCG GCCACCCTTG CTTTCTGCCA CTCAGCCCTT GCAGGGGCTT 1200 CACACCCCAA GAGGGGCAGT CTGGGCTGGG GCTCCTGGAC TCCCTAAGGC ATTATCCCAT 1260 CCCCGCAAGT TGCCCGGCCG GGCCCTGAAG GAAAGGGGCC CCGGACCCAG ACCCGAAGGC 1320 TGCTCACCAG AGGCTCTGCC CAGGGACTCT CACCTCTCCA GCCACTCCAA CTCCCCTCCG 1380 GCTTTCCTGT CATTTCCTGA TGCCACAAAT CTTCTGACAT CCTCCCTCTT CCCCAGTGAA 1440 TTTCTTCCCC AGGCCCTTCC CTTCCTCAAC CTGCTTCATA CTGGACATTC CCAGCTGGTA 1500 GGATCTGCCT GTGGCTCTGC ACAGGAGGCT GGGCAAGGGT GGAGAAGACT GGGGGAGCTG 1560 TCTCCCATGA CCCCAGCAGA GGCGAGAGAC AGAAGCTGCA TCTGGGACCT GTCGGCTGCA 1620 GTTTTGGGCA TTCATACCCA CCTAAGCATT CTGGAACAGC CCTGAACCTG GGCATCAAAC 1680 TCCCCAGGCT TGAGAATGGT GAACACTACT ATTAGGCGCC CCTTCCTCCA GGCCTATGCC 1740 GACTCCCCTG TGCCCATGGA AGCTGTGTAG TCCATGCTGG CTCTGGCTCA TGTGGGTGTC 1800 CGGACAGTGA GGCCGAGGCG GCAAGGGCCC TTTACTCTGT GCACTCCCAG CTCCCCATCC 1860 CAGCCAGGGC AGCCTTGACC CTCCTGCCCC CTTGCTGTGC CATGTGTCAG TTGGCTGGGA 1920 TCATGCTCTT CCCCCGTCTC CATCAAGAGG ATCCAACAGC ATCTTGCAGC TAACACTGGG 1980 GCATGGGAGT GAGGGAAACA AACATGGTAC CCACTCTTCT GTCCTAATGT TTAGAATCAT 2040 GGGGCAGAAA AGCATCCTAG AACTCATCTA GCCCAACTGT CATTTTACAG AAAACAGGAC 2100 AGAGAGAAAA TGACCAGCCT AAAGCTCTTG GCTACTCAGG GCAGCTGGGA CAGGGGTCTG 2160 GTTTCCCGGC ATGGAGCCAC AGTGTCTGGA TGTGCTGGAA CTCGGCACGT CCCCCTGAGA 2220 GTTAGCTGCA GAGGTGGCGT ATGGGAGAGG AGGCTGGAAA ATAGGCTTGG AGGTTTCGTC 2280 CAGGCACACA GATTCTCTCC CCCTAATCCT CAGCCCCTCC TTTTCTCCCT TTCAGCAGCA 2340 GTTATAAAAT CCAGGAAATA AATGTGGATT GATGGCCTAC AAAGGGCTTA GTTAGTGCTG 2400
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