| Tag | Content |
|---|
EnhancerAtlas ID | HS133-12684 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr17:42199890-42200870 |
Target genes | | Number: 14 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr17:42200732-42200750 | GGCCGGGAGGAAGGAAGG | + | 6.63 | | EWSR1-FLI1 | MA0149.1 | chr17:42200736-42200754 | GGGAGGAAGGAAGGGGGG | + | 6.89 | | Myod1 | MA0499.1 | chr17:42199897-42199910 | TGCAGCTGTTACC | + | 6.39 | | Myog | MA0500.1 | chr17:42199896-42199907 | CTGCAGCTGTT | - | 6.02 | | Tcf12 | MA0521.1 | chr17:42199896-42199907 | CTGCAGCTGTT | - | 6.62 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_02175 | chr17:42198849-42201075 | Aorta | | SE_06252 | chr17:42178460-42202191 | Brain_Hippocampus_Middle | | SE_08168 | chr17:42184656-42202224 | Brain_Inferior_Temporal_Lobe | | SE_40906 | chr17:42198942-42202006 | Left_Ventricle | | SE_48221 | chr17:42198839-42201999 | Psoas_Muscle | | SE_51633 | chr17:42198674-42202284 | Skeletal_Muscle |
|
Enhancer Sequence | AAGCAACTGC AGCTGTTACC TTTCCTCTTT AGGGACACAC CTCATTTCAG AAGGGGTATC 60
AGCCAGGGGT ATCAAGTGGT CATCTCCTCT CCCAAAGGAA GCACCCAACC TCCCCACTTC 120
AACAGCCCCC ACCAAGCTCC CAGATTAATT ACTTACACCC AGCCAGTTCT CATCTTCCCC 180
AGGGCCCCAG GGAAGGGTGG GGTGGAGAAG CTGACTCCCC CCAAGTTAAT AAGGCACTGG 240
TAGTGCCCCC GCTTCCATGA GATACAGATC CAGGATGAAA AATGGGGGGC ATCCACCCAA 300
GACAAGAAGG GGTTGGGGGG GAGCTCCATT TCATCTCCTA GCTCTCGCAT CCTGGCTCCA 360
AGGTGTCAGA CAGGAGAAGA GGGTGGCAAC AAACGCAGTA ACGCCTCACA GGAGACGGGG 420
TGAGAATAAT GGGAGAGAGA AGTAAGGTGG ACTCCGCAGT CCCCCTCCTC ATGCACGGAA 480
GTCAAGGACA TAAAATCAAG GATGCGTTCG TAGCTATGGG GAGAAGCGCT CTGGGTGGAC 540
AGCACCCCTC ACCTCAGAGT ACCAAGAAAG GGGTGTCCAG CGAAGAGGGG TCTGCACAGA 600
ATCCGGGTGC AGGGCTCAAA TGGCTCTGCA ACGCAACATG CGCCGCCAGG GAAGGGGCAA 660
ATCAGACAAC CCCGGCCGGT CTCCGAGCCA TTTGGGGGCG CAGGGCGCGA GAAGGCGGGC 720
CCCTCCCTTA CCTGTAGGGA AGGCGCCCCT GTCTGGGAGG GGCAGGGAGG GGCGCGCGCA 780
GCAACCCCGA TGTCCCGCTC ACGGGCTGCC GATGCTCCCG GGGGGCGCCG GCTGGCTCCC 840
AGGGCCGGGA GGAAGGAAGG GGGGCGCGGA GCGCGGCGCG CGCGCTGGGA GCCCGCGGAC 900
AGAGACAGCA GGAGGAGGGG GCGCCGCCTC GCGTCCCGGG GTCCGGGGAA GATGGGATCT 960
GGGCCGGGGC GGCGCGCTCA 980
|
