Tag | Content |
---|
EnhancerAtlas ID | HS133-12313 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr17:17642310-17644060 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MYC | MA0147.3 | chr17:17642470-17642482 | AGCCACGTGCCC | + | 6.18 | MYCN | MA0104.4 | chr17:17643914-17643926 | GGCCACGTGGCC | + | 7.22 | MYCN | MA0104.4 | chr17:17643914-17643926 | GGCCACGTGGCC | - | 7.22 | Stat6 | MA0520.1 | chr17:17643661-17643676 | CTCTTCCTCAGAAAC | + | 6.37 |
|
| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_00905 | chr17:17641235-17645270 | Adrenal_Gland | SE_02900 | chr17:17641727-17644269 | Bladder | SE_03155 | chr17:17641782-17646522 | Brain_Angular_Gyrus | SE_04718 | chr17:17641708-17653758 | Brain_Anterior_Caudate | SE_05252 | chr17:17638780-17657618 | Brain_Cingulate_Gyrus | SE_06257 | chr17:17638815-17657693 | Brain_Hippocampus_Middle | SE_07567 | chr17:17641461-17653778 | Brain_Hippocampus_Middle_150 | SE_08244 | chr17:17638844-17657613 | Brain_Inferior_Temporal_Lobe | SE_08869 | chr17:17642605-17643903 | Brain_Mid_Frontal_Lobe | SE_24124 | chr17:17640598-17643732 | Colon_Crypt_2 | SE_26187 | chr17:17641933-17643363 | Duodenum_Smooth_Muscle | SE_26567 | chr17:17640330-17645707 | Esophagus | SE_31179 | chr17:17640686-17642765 | Fetal_Thymus | SE_31179 | chr17:17643527-17644261 | Fetal_Thymus | SE_31385 | chr17:17640397-17645581 | Gastric | SE_33597 | chr17:17640723-17645820 | H2171 | SE_33924 | chr17:17640861-17643480 | HCC1954 | SE_42180 | chr17:17641697-17643960 | Lung | SE_47257 | chr17:17642517-17644020 | Panc1 | SE_50171 | chr17:17640497-17644271 | Sigmoid_Colon | SE_53329 | chr17:17641032-17645570 | Spleen | SE_54742 | chr17:17641732-17645910 | Stomach_Smooth_Muscle | SE_55326 | chr17:17643760-17644226 | Thymus | SE_58709 | chr17:17640373-17671122 | Ly1 | SE_63051 | chr17:17614295-17670945 | Tonsil |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I017736 | chr17 | 17639535 | 17646164 |
|
Enhancer Sequence | TCCTGGCAAC CAGGAAATTT CTGTCAGTGG GAACAGCCTG CCCAAGGCCT CCTCCACCCC 60 TGGGGAAGAC AAGTTGTATG ACAAGGGAGA CAGAGGCAAT TCAAAGTGAA GAACGGGAGT 120 GAGGCCGCCT CCTCCGTGCA TATTGCTCAC ACACTGGGGC AGCCACGTGC CCAGTAAAGG 180 CTCTCTTGAA AACCGTGGAG ATAGGAGCCA AGCTCTGCAA GGCCCTGACT AGCTCACCTG 240 ACCCCTGGCA TCTAGAAGCT CACAGCCTAT TCTTGGTGGA GGTGTGGCTA TGGCTGCCCT 300 CCAAGGAGGG GAAGACAGAG ATGGCTGGAC AGGATGGGAC AAGCCAGCCC CCAGGAGCTG 360 GGGAAGCGAA GGTGGGTGCA AATGAAAACG CAGAATCCCA TTTGCAGTCC ATTTGCTTAG 420 CAGCCCTGAC CAGGAGGGAG AGAAAGAAGA GGGCAGAGCA GGGAGAGATG GGGAGGGATA 480 AGGATACAGA GAGAGAATCT GGCAGCCAGG GGTCAGGGAG CCTTTGGCCG TAAGGCCTGG 540 GATGCCTGCT GCTTACTGAG GCTGTGGCCC CTCCTGCCTT CCAGAGCTAA GAAAGCTTTG 600 CTCTGTCTCA GCTCCAGACA CCGCATCCCC ACCACACATT CCAGCACCTG CCTGCTTCCC 660 CTGACCTCTG GCTGCCCCAC AGACCCCATC CCTACCTCCA CTCCTTGGGG ATTTTGAGGT 720 CTTATGCCAC CACTCCACTC TGAGCAGGCT CAGTCTCCCT GTGTTGGTGG TGGTGCGGGG 780 TGGTGAGAGT GGTCCTGGAG CAGTGGGAAC TACCCGGAGG CCACCTGGGG TGGGTCCCAG 840 GCACCAGTCC AGCTGGCCAG TGGGCCACGG GGGCTGACCT TGTCACCTTG GGCCCAGATG 900 GAGGGCAGCG GTGCTCGGCC CTTCCCCCAA GCACATACAG CCGCTGAGCT AACATGACTC 960 ACCGCGTGGC AGCTCCCTCT CCCCACTGGG AGTGGGGATG GAAGCCTCCA GATGCTGCAG 1020 CCCCACCCTG AGGGAATCAC AGGCCAGGCT GAGCCCTTCC AAAGTGGGGA TAGCTGGGGA 1080 TCAGACATCA GCATCCATTG AAGGGGGTGT TCACCCGCAT GGGGTAAGCC CTGTGCCTGG 1140 GACTCTGGGC TTAGTGCCCA GCTAGGGCCT TGGGAGACCC TTGGGCTTCT CTGTGCTCAG 1200 GGGGAAAGGA GCTGTGCAGC CTCTAGGGGT CCTGCCTGCC CCAAGCTGTG CTGGTGGTCC 1260 AGGCCCCCTT TGGGGAGGAC CCTGGCCAGG GGTCCCTAGC TCCTCCTCTG TCATCCAGAG 1320 AACCCTTAGG TCCCAGGGGC TGGTGGTGTT CCTCTTCCTC AGAAACACTA CCTGCAAGAC 1380 TGGAACCCTA ACACAGCCAC CTCTGGAGAG TTGGGGGTCA CCCATCTCTT CTTTGCTCCC 1440 CACCCACCCT GGTGGAAGTG GTTCATCTGC TCTGAGCCCT AAAGAGGACC AGGTGGGAAA 1500 GAGGCCTGAT GCCGTGCTGG GGGCTTCGAA TAGGTACAGG CACTTCTCTA AGGTTGCTGT 1560 GTAGGGCAAG AAAATCAGCT CAGAGAGTGA ATGAATTTGC CCCAGGCCAC GTGGCCATCA 1620 GGTGGCCTGG CTGGGGTTTG AACCTGTCTT CTCAGAGCAA AGCTGACTTG GCTGCACCTC 1680 CCTGGACTTC AGCTTTCAGG GAGGGAGGTC CAGGCAGCAG GAGCCTGGGG GACAATGCTA 1740 TTTTTCATAT 1750
|