EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-11090

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr16:20752160-20752830

Target genes

Number: 4
Name	Ensembl ID

THUMPD1	ENSG00000066654
LYRM1	ENSG00000102897
ERI2	ENSG00000196678
DCUN1D3	ENSG00000188215

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr16:20752569-20752590	AAAATAAAAATAAAAGTAATG	-	6.58
Klf12	MA0742.1	chr16:20752700-20752715	GGCCACGCCCCTACA	+	6.11
SP1	MA0079.4	chr16:20752698-20752713	GAGGCCACGCCCCTA	+	6.42
SP4	MA0685.1	chr16:20752698-20752715	GAGGCCACGCCCCTACA	+	6.46
ZNF263	MA0528.1	chr16:20752763-20752784	CCCTCCACCCTTCCCTCCTCC	-	8.51

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_15070	chr16:20750956-20753949	CD4_Memory_Primary_7pool
SE_21226	chr16:20751041-20753821	CD8_Memory_7pool
SE_40211	chr16:20751149-20753818	K562

Enhancer Sequence

GTAAACCTAT TATTTCAGAA ATATTATTGC TTCAGGTAAA CACATTATTA CTCCAACTTC 60
ACGAGGCTGT CATGAAAAAT GTGTTTCTGA AAGAGCTTCA GCACACCGCC TGGCCCTCAA 120
TGAGCAATCC TTAAGTGGGA GGTAGGCCGG GCTCAGTGGC TCGCGCCTGT AATCTCAGCA 180
CCTTGAGAGG CAGAGACGGG AGGATCGCTT GAGTGTAGGG TTTAGGACTA CCCTGGGCCA 240
AACAGTGAGA CCCCTTATCT ACAATTTACA AAACTTAGCC GAGAGTGGTG GCGCGCACTC 300
ATAGTCCCAG CTACTCTGGA GGCTGAGACA GGAGAAGTCG AGGCTTCCCT GAGCTATCAT 360
CACGCCACTG CACTCCAGCC TCGGCAACAG AGCGAGACCC TGTCTCACAA AAATAAAAAT 420
AAAAGTAATG GGAGCTACCG TGGTTACTGA TGGCAAGAAA AGGTGCAAGC ACTTCAAGCA 480
CAAAACCGAT AGCACCGAAG TCTGCGAGCG TCTCAGGACT AGGGACGGAA ACGCCGGCGA 540
GGCCACGCCC CTACAGCCGT CACGCCGACG ACCCGAGGCG CGCATGCCCA TACCAGCAGC 600
CATCCCTCCA CCCTTCCCTC CTCCCGCAAG GCCTGGCAGC CGGCCCGCCC GCCCACCCCG 660
GGACCGGTAC 670