EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-07934

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr12:102223270-102224330

Target genes

Number: 9
Name	Ensembl ID

RPS27P23	ENSG00000239413
CHPT1	ENSG00000111666
SYCP3	ENSG00000139351
RP11	ENSG00000258230
GNPTAB	ENSG00000111670
DRAM1	ENSG00000136048
CCDC53	ENSG00000120860
NUP37	ENSG00000075188
PARPBP	ENSG00000185480

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr12:102223791-102223812	AAAAAAAAAGAAAAAGAAAAA	-	6.09
Nkx3-2	MA0122.3	chr12:102223835-102223848	CAAACCACTTAAA	+	6.24

Enhancer Sequence

AAAATAAAAT GAAGAATTCT AACACCTGAT GCCTTTAAGT CATCTTCACA CTGCATGGGA 60
CTTAATAAAC AGTTAACTCA AAATTAATCA AGGCCAAAAA AATCACACAA AAGCAATAAG 120
GCACCTAACT ACACACAGAT ACATTAAGTT GCAACACATG AAACAAAGAC GAGCAAGTAC 180
TATAATATTA AGTACATATT TCACACTTAC AAATCTGGAG CTTTCTCACC CTTATGGTAA 240
GACATTTTTT CCCAGCCTCT AGAACCAAGA ACTACTAAAA AAGTACATGC TCAGAATTCA 300
TGCCATATAA TTTAGCCATT AAACAAACAC TTGCACTGCA TTCTCTGGCA GTACCTGGCA 360
CTGTGCTTGG GCCAGGGTTA CAGTATTTAC AGACAGCACC TTCTCTTACG GAGCTTACAA 420
TCCAGCATGG GTAAAGACTT CAAGCAAATG TATACTGTGG CATTTCTAAA AACTACTCTG 480
TTAAATTTTA AAACCTTTTG TAACCTCCTA CCAAAAAAAA AAAAAAAAAA GAAAAAGAAA 540
AAAACTAAAA CTAAGGAACA GATTTCAAAC CACTTAAAAA TACAGCTTTC CTCCCCGTTG 600
CTAAAAGTGG CTTTCTTGGG CCAGGTGCGG TAGCTCATGC CTGTAACCCC AGCACTTTAG 660
AAAGCCAAGA AGGGAGGATC ACTTGAGCCC AGGACTTCCA GACCAACCTG GGCAACATAG 720
GGAGACCTCC GTCTCTATTT TTAAAAAACG GTGGGCGAGG GAGCAATATC TAAAATCACA 780
TACATGCCTT TTTCCAGTTC TGACTTGCTC ATAGTCTCTG CACACGTTTA TGATAAAGAA 840
TACTGTATTT GGCCGGGAGC GGTGGCTCAC GCCTGTAATC CCAGCACTCG GGGACGCCGA 900
GACAGGGCGA TCGCCTGAGC TCAGGAGTTC GAGACCAGCC TGGGCAACAT GGCAAAACCC 960
CGTCTCTAAT AATGAAAAAA TACATACTGT ATCGGGGCAT CGCGGGGCAC GGCGAGGGCA 1020
GTGCAGGGTC GAGGCGCCCG GTCCAGGCTG CGGCGCCGCT 1060