EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS133-07008 
Organism
Homo sapiens 
Tissue/cell
melanoma 
Coordinate
chr12:7061340-7063960 
Target genes
Number: 51             
NameEnsembl ID
RP1ENSG00000256103
TNFRSF1AENSG00000067182
LTBRENSG00000111321
CD27ENSG00000139193
LOC678655ENSG00000215039
TAPBPLENSG00000139192
VAMP1ENSG00000139190
NCAPD2ENSG00000010292
MRPL51ENSG00000111639
SCARNA10ENSG00000239002
GAPDHENSG00000111640
RP5ENSG00000245667
IFFO1ENSG00000010295
NOP2ENSG00000111641
SCARNA11ENSG00000247853
CHD4ENSG00000111642
ING4ENSG00000111653
ZNF384ENSG00000126746
C12orf53ENSG00000139200
COPS7AENSG00000111652
PTMSENSG00000159335
MLF2ENSG00000089693
LAG3ENSG00000089692
CD4ENSG00000010610
GPR162ENSG00000250510
U47924.11ENSG00000256010
LEPREL2ENSG00000110811
GNB3ENSG00000111664
U47924.25ENSG00000237240
CDCA3ENSG00000111665
USP5ENSG00000111667
TPI1ENSG00000111669
RPL13P5ENSG00000240370
LRRC23ENSG00000010626
DSTNP2ENSG00000248593
SPSB2ENSG00000111671
ENO2ENSG00000111674
ATN1ENSG00000111676
C12orf57ENSG00000111678
PTPN6ENSG00000111679
SCARNA12ENSG00000238795
EMG1ENSG00000126749
PHB2ENSG00000215021
U47924.19ENSG00000255896
C1SENSG00000182326
LPCAT3ENSG00000111684
C1RENSG00000159403
C1RLENSG00000139178
CLSTN3ENSG00000139182
RP11ENSG00000256967
PEX5ENSG00000139197
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr12:7063039-7063057CCCTCCTTCCCCCCATCC-6.18
ZNF263MA0528.1chr12:7062408-7062429GCCCCCTGCCCTTCCTCTTCC-6.09
Number of super-enhancer constituents: 35             
IDCoordinateTissue/cell
SE_09821chr12:7057722-7072113CD14
SE_10294chr12:7057787-7072648CD19_Primary
SE_11246chr12:7051570-7075651CD20
SE_11874chr12:7057290-7072000CD3
SE_13696chr12:7059354-7064308CD34_Primary_RO01536
SE_15448chr12:7059390-7063771CD4_Memory_Primary_8pool
SE_15935chr12:7059481-7063047CD4_Naive_Primary_7pool
SE_16424chr12:7057934-7063850CD4_Naive_Primary_8pool
SE_16892chr12:7057515-7065729CD4p_CD225int_CD127p_Tmem
SE_17385chr12:7051304-7075645CD4p_CD25-_CD45RAp_Naive
SE_17804chr12:7051451-7075926CD4p_CD25-_CD45ROp_Memory
SE_18513chr12:7051903-7072452CD4p_CD25-_Il17-_PMAstim_Th
SE_19322chr12:7057416-7072760CD4p_CD25-_Il17p_PMAstim_Th17
SE_20105chr12:7057420-7072350CD56
SE_21550chr12:7059066-7064151CD8_Naive_7pool
SE_22026chr12:7059039-7066905CD8_Naive_8pool
SE_22431chr12:7051483-7072746CD8_primiary
SE_32571chr12:7058059-7071909GM12878
SE_50217chr12:7059210-7076065Sigmoid_Colon
SE_53937chr12:7057924-7072654Spleen
SE_55163chr12:7059653-7064143Thymus
SE_59538chr12:7045399-7071773Ly3
SE_59972chr12:7045722-7069352Ly4
SE_62072chr12:7045612-7071479Toledo
SE_62347chr12:7051577-7074891Tonsil
SE_66670chr12:7059219-7064681Jurkat
SE_67220chr12:7057771-7064582MM1S
SE_68053chr12:6999072-7081180TC32
SE_68054chr12:6999072-7081180TC32
SE_68055chr12:6999072-7081180TC32
SE_68056chr12:6999072-7081180TC32
SE_68057chr12:6999072-7081180TC32
SE_68058chr12:6999072-7081180TC32
SE_68059chr12:6999072-7081180TC32
SE_68060chr12:6999072-7081180TC32
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 3             
ChromosomeStartEnd
chr1270615037061663
chr1270626357063280
chr1270619117062149
Enhancer Sequence
GTGAGGGCTC CGCACCCCCG CCATTCCCAA GCAGGGATGA GCCGGCTCCC ACCCTGAACA 60
GCCAGGGAGG CAGGGAGACT GGCAGCCGGC GCTGCCTACC CTCCATCCCC TCCCCTCCCT 120
GCACCAGCTG GGGCTCTCAA TGTCCCTCCT CCCTGCTGTC CTGGGACCTG GTGTCTCAGA 180
GCCTAACCTA CCACCCTTTC CACCTAACCC CGAGGAAGCC ACAGAAAGCT GCCTCGCCCT 240
ACTCCGGGAG CCCTGGCCGC TGCAACCCAG GTCCCACTGG AGACAGGGAG GCCACTGCTG 300
GTGGCCAGCA TGTCGTGCAG GCCAGCTCTG TTGTTAGAAA GCTCTTCTTC CTCTGGAATC 360
GAGCCTGCCT TCCTCCGTCT GCCCCTCACC CCAGCACATG TTAGGACAGT GAGGAGCTGA 420
CACTGGGGTG AAGATGGGGA TGAATGCTTG CCAAGACACT TGATGCCTTG TCCCAGCCGC 480
CCCGTGGGGA TGGGTCTGTC CTGTGGGGTC AAATAGGTCT CCGGCCCAAA CAGAGATCAT 540
TGAGAGCACG ATGTGAAGTG TTCACCTGTG TAAAGTGTCT CACGCTGTCC CGGGCACAGA 600
GTAATACTCC AGGCATTTCC TTCCTGTGGC CTCCCCGACT CCTCCTGTGG TCTCCCAAAG 660
GCATGGGCTG GGGGCTGGGG GCTCTGAATG CTCCTCATGA CACCATGGCT CCTTTCAGCA 720
GCCGCATCTC AATGCCAGAT CCCCTTAGAG TAAAGGGCAG CGGAATAACG CTAGGGGGTT 780
TTCACATGCA CCCCTGGGCC AAGCCGACTT GCCCTTGCCG TGGATCCCTG CATTCATGGA 840
TCGGTTATTG AAATGATCGG GAACCTTGCT CCTGCCAGCT TGCAGCCTCT CTGAGATTCG 900
GGCCTCCAAA CTGCATCAAT ATTTTTGGTC AAGGCACTGA TTGAAACTTA GAGCTGGATT 960
CGGTCACGGT GCAGCCCTGT GGCCCACCTG GGAGGCCTCC TTTCCTGGAT CGGCCTCCTT 1020
CAAGGCCTTC CCTCTCTCTG TGAGCCTCAC ATGGCTGGCT CCGTGTCTGC CCCCTGCCCT 1080
TCCTCTTCCC CACCGCAACA CTCAGGGGGC TTTTGGCACC GAGACCCTCT AAAGCTCATG 1140
TCCTCTCTTT CTCCTTGCCT CCAGCCAGGA GAGGAGGACG GGCTGACCAG TGCCTGGAGG 1200
TGGAAGAGAG GAGCAGGGCC CCAGGAGGCC CCTGCAGAGG AGGCTGAGGC CTGGGTTCAA 1260
GGAGAAGAGA GAAGAGAGAG AAGGAAGGGA GGGCAGTGCC GGGGCGGGAG GTTAAGACCA 1320
GGGAAGCCGC ACTGGAGGCC CTTTTGGGTG ACCCGTCCCA GGAGCCAGTG TCACCCCTGA 1380
GCCTGGGAGT GTGTGAGAGG CTCTTTCTCC CAGGTTCTGC TGTGTCCTCT GCCTTGTCTG 1440
TGCGCCTCCT CCTCTGCGAG AATTTGCATC TGTCCCTCGG TGGCTCTGCG CTTCCTGTGG 1500
TCAGCCTGAC ATTTGCATGG AGACTTCCTC ATCCTGGGGC CTGAGGGAAG GGGCTCAGCC 1560
CCCTCCCCGC TACCTGGGGT CCTAGCCTGT CCCCAGGCGG TGGGCTGAAG TAGCCCAGTG 1620
GGGTTAGGAG GCTCTGGGGG TCTCTCGGCT GGAGTCACCT CCGGGCAGGG GTGAGATGGG 1680
TTGGGACAGA CTGGTCCTCC CCTCCTTCCC CCCATCCCTG CGGTTGGAAA ATTTGCCCGC 1740
CCTCCCCTCG TCCCTGGGCT GAGGAAACCT CACAACCTCA CTTCTCACTC TCTCCCCAGA 1800
AGGAGTTTTG TGTTTTTTCC ATCACGTGGT TTCCTGTGGG GCTGGGCTTT GTGGGGCTAC 1860
AGTTTCCTCC TGGGAAAGGG GTGTGCTTCG GGGAAAGGGC TTAGTTCTGC TTTCTGCCCT 1920
GACAGCCCCT TCAAATCCGT TTGAACCCTG GGCTCCCCTT CAGTGACATC ATCCAGGGCA 1980
CCCCAGAACC CCCTACACCA CTCTTTCCCC AGTGGGGTTG TCTTCCCCGC CTCCCTGGCG 2040
GAGCGCACCC CATCCGCCTT CCTTGTGACT TGAGTCTGTG TGTCCATCTC CCACCACTCC 2100
CTGTGGTGTG GCCTCGGTCT GCGTTTCTCT TTGCCTCTGG TCTCTGCTGG GGCACAGTCC 2160
CATCCTTCAC GGAGATTCAT CCTTAGCTTC TCTCCTCCAA ATATTTTGAA TATTGCCAGC 2220
CTTTCTGCCT TTCAGAGGTG GGCTCTGGGT TCGAAGCCCG GTTAGAACTC TGGAGGCTAG 2280
GATGGCTTGA ACCTGGGAGG TCGAGGCTGC AGAGAGCTGT AACCGCGCCA CTGCACTCCA 2340
GCCTGGGCAA CAGAGCTCTG GAAGCTTGCC CTAGAGTCAG TCAAGGGCCC TAGGCCAGTG 2400
AGTAACAGCT CAGCGTCAGT TTCCTCATCT ATAAAATGGG GGTAATATCA TACCTAGCTC 2460
TCAGCATGTT TGTGAGAGAC CTAAATGAGG TGGTGGATTT GGAAGCATGT AGCGCAGTGC 2520
CTGGCACACA GTAGGTGCTT GATTTCCGGC CCCTCTCTGT GAATGTCTCT GCTCAGCGCC 2580
TTCCCCTGTG GCCTGGGTCT TACCTTCCCT GACGCTGCCT 2620