EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-03894

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:235560350-235561780

Target genes

Number: 8
Name	Ensembl ID

ARID4B	ENSG00000054267
TBCE	ENSG00000116957
B3GALNT2	ENSG00000162885
GNG4	ENSG00000168243
LDHAP2	ENSG00000235674
LYST	ENSG00000143669
RP4	ENSG00000235371
ERO1LB	ENSG00000086619

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr1:235561631-235561643	TCTATTTTTAGT	-	6.27
MEF2B	MA0660.1	chr1:235561631-235561643	TCTATTTTTAGT	-	6.32
MEF2C	MA0497.1	chr1:235561630-235561645	TTCTATTTTTAGTAG	-	6.57
Nr2f6(var.2)	MA0728.1	chr1:235560748-235560763	TGACCTCGTGACCTT	-	6.82

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I235397

chr1

235560582

235563160

Enhancer Sequence

GCCATCTTGG CTCACTGCAA CCTCCACCGC CCTGGCTCAA GCGATTCTTT TGCCTTAGCC 60
TTCCGAGTAG CTGGGACTAC AGGGGTGCGC CACCACGCCC AGCTAATTTT TGTATTTTTA 120
GTAGAGACGG GGTTTCACCA CGTTGGCCAG GATGGTCTCA ATCTCTTTTT TTTTTTTTTT 180
TTTTGAGACG GAGTCTTGCT CTGTCGCCCA GGCTGGAGTG CAGTGGCGCG ATCTGGGCTC 240
ACTGCAAGCT CCGCCTCCTG GGTTCACGCC ATTCTCCTGC TTCAGCCTCC CGAGCAGCTG 300
GGACTACGGG CGCCCGCCAG GATGCGCGGC TAATTTTTTG TATTTTTTAG TAGAGACAGG 360
GTTTCACCGT GGTGCTAGCC AGGATGGTCT CGATCTCCTG ACCTCGTGAC CTTGTGATCC 420
ACCCGCTTTG GCCTCCCAAA GTGCTGGGAT TACAGGCGTA AGCCACCGCG TCCGGCACTT 480
TGTTGATTGT TTCTTTCGCT ATGCAGAACT TTTGTGATGG ATTAATTATT TTTAATTCTT 540
GTGATGTCAG TGAAGTTGGG CCTGATTATG ATTGGCTTTT CATGTGGCTT GAGTCCATGG 600
AGAATAGGAA ACAAATTAGG TTGACCAGAG TAATCAGGTT TGTGTGACAG CTTTATTAAT 660
CATTGTGAAT TAATAAACCT GTGTGCTAGT GTCTGGTTCA GTCTTCTGTG CATTTGGAAT 720
TTTCAAATTG AGGCTATCAG GGTTTGTTCG CCCTGGATGT AGAAAGCAAA AATCTGGATC 780
TTACACATTC CTGGGATCTG ACTGGTGAGG TATACCCTTA TACCATGTCT GTCCACTCTC 840
TTACTCATAC TGGTTTCTGT AGTTGCTCCT CTATCATTAA TGTACTGGCC CCAGGGGAAA 900
AGCTTGCTAA ACCATAGATA TTCTTCGTCA GACTTACAGC TAATCACAGT TGAATGCTGG 960
CCTTGCTCCT TCTGTCTGCT TTGGCTTGAA AAATGACTTG TGCTTTGCAG TGTGAGAGAA 1020
TGGCCTTATT TTGTGCATTC TTCTTTGTAG CATCCATCAA TTCAACCCAT TCTGATAGTT 1080
TCTATGATGA TAACATTTAC TTCTTTCTTT TTTTTTTTTT TTCTTTTGAG ATGGAGTTTT 1140
GTTCTTGTCG CCCAGGTTGG AGTACAATGG TGCGATCTTG GCTCACTGCA ACCTACACCT 1200
CCTGGGTTCC AGCAATTCTC CCAACTCAGC CTCCCAACTA GCTGGGATTA CAGGCACCCG 1260
CCACCACGCC CGGCTAATTT TTCTATTTTT AGTAGAGATG GGGTTTTGCC ATGTTGGTCA 1320
GGCTGGTCTC AAATTCCTGA CCTCAGGTGA TCCACCTGAC TTGGCCTCCA TAAGTGCTGG 1380
GACCATAGGT GTGAGCCACC GTGCCCGGGT ATTGGAAAAT GTTTTCTTTT 1430