Tag | Content |
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EnhancerAtlas ID | HS133-03716 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:226904270-226905700 |
Target genes | Number: 10 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SOX10 | MA0442.2 | chr1:226905277-226905288 | TTCTTTGTTTT | - | 6.62 | SPI1 | MA0080.4 | chr1:226905081-226905095 | AAAAAGGGGAAGCA | + | 6.11 | SPIC | MA0687.1 | chr1:226905081-226905095 | AAAAAGGGGAAGCA | + | 6.19 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_03869 | chr1:226904097-226905906 | Brain_Anterior_Caudate | SE_04801 | chr1:226904022-226905930 | Brain_Cingulate_Gyrus | SE_05781 | chr1:226904266-226906114 | Brain_Hippocampus_Middle | SE_06710 | chr1:226903885-226906070 | Brain_Hippocampus_Middle_150 | SE_07746 | chr1:226904074-226905589 | Brain_Inferior_Temporal_Lobe | SE_10211 | chr1:226904337-226905863 | CD19_Primary | SE_10887 | chr1:226895020-226908737 | CD20 | SE_11833 | chr1:226903638-226905340 | CD3 | SE_13607 | chr1:226903752-226905897 | CD34_Primary_RO01536 | SE_17296 | chr1:226887872-226908646 | CD4p_CD25-_CD45RAp_Naive | SE_17765 | chr1:226904063-226905940 | CD4p_CD25-_CD45ROp_Memory | SE_18263 | chr1:226904082-226906345 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19160 | chr1:226904832-226905848 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20012 | chr1:226904455-226905830 | CD56 | SE_22315 | chr1:226904134-226905880 | CD8_primiary | SE_40782 | chr1:226904812-226905852 | Left_Ventricle | SE_42228 | chr1:226904848-226905840 | Lung | SE_50140 | chr1:226904650-226905816 | Sigmoid_Colon | SE_53341 | chr1:226904623-226905852 | Spleen | SE_55112 | chr1:226905164-226905619 | Thymus | SE_58303 | chr1:226819953-226937809 | Ly1 | SE_59629 | chr1:226819233-226928465 | Ly4 | SE_60416 | chr1:226819368-226929640 | DHL6 | SE_62233 | chr1:226813614-226929647 | Tonsil |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I226716 | chr1 | 226903775 | 226907883 |
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Enhancer Sequence | CCACCCGCAA AAGGCCTCAG TGTGTGTTGT ACTCAAAGTT TTTTTTAAAA AATCTGTTGA 60 ACAACTGCAA CCAGCATCAA ACCTAGGTTT TCAAAACGTA CCAAAACGGA AAAATATTCT 120 GAACCAAACC ATCATTTGAT TCAGTTCCAA CTTTGGTCTT GAGCCCAATC AAATAACCAC 180 TGAAACATGC TGGACAATTC TAGTGGGCCA CGGGGACTGG GTGGAAAGCC TGTGGTCATC 240 TGTCTCCATG AGATGATTTC CATTCCCCAG GCTCAGGGAA TACATGGGAA AATCCTCTGC 300 CCATTTTCCA AAAATCCTTT AAGCCCATAT AGAAAACAAT ACTTTCTTTG TGATAGATTG 360 TTTATACAAA TTCACCAAAG GAGATTTTGC AAATATTATA TAGACTTCAT CATACCGAGG 420 GAGAAATAAC CATGCCTTTT AGTTTCTTCT GATTCACTGA AATGAGGACT AAGATGCTTT 480 ATTTCACACA CTACCGGGTT CATGTATATC ACCGGGCAGA AAAACAAACA TAAATACCTT 540 CTTAAGCAGA TGACATCTTC CCCTGTTTCT CGATGGAGAC CAAATCCTCC CGCAGGTACT 600 CAAACTAGTA GCAATCCCAT TAACTCTCAA GACTACTTTC TGCTGCCCCC TCCTGAGACA 660 GGAGTTAAAA GATGGCAAGG ACATGGGCAA GTGGCCTAGG GTGCAAGGTG AAATCTAGTG 720 CTAGCTTTAA AGAGAAAATT CCTTCCATCT CTGTGGTTAT GAGTAGTTCT AAATTACATA 780 CCCCATGTTT CTTTTTTGGC TTAATTACAA TAAAAAGGGG AAGCATCTCT GGGACCTTCA 840 GCATGACTAT GTTGCAAAAC TAAACCCAAA GCACAGGCCC AGGCTGCAGA GAGACAAAGG 900 GAAGCACCAG TGGCGGAAAG GAAGCCTCAC CCAGAGTGGG GCCTGGTCCT CAGCCACCAT 960 CTCGGAGGCG CCCAGAGGGA GGTGGCAAGG AGACACTCTG CATCTGCTTC TTTGTTTTTC 1020 TTTTTATTTC CAGGCCCCAA CAATCAATAA ACAACTTTCC TTAAATAATA CAGCACCTGT 1080 GAGTCAGCCT GGGTAAGCTC CTGTGGAGAC GGAGCTGGGA GGTGATGGCA TGTGGGCAGG 1140 GGCCGCCGTC CGGGCCTCCT ACACACCACA GCTCCCACCG GGCTGCCCGC CAAGGGGCAT 1200 GACTCTATCC TGGAGTCAGA GGACACTGGG AGCAGGAAGC GACCTCAGAG ATGACCAAAC 1260 ACCTTCACCT GAAGCCCTGA GAGGCAAAGC CCAAACAGGA GGCCAAGGCT TTTGACACCC 1320 TGCCCGTTTT TATAGCACCT CTGTGGAATT GTTCATTTTC TAAGCCAGAT CATTCCACAG 1380 AAGGAGACGG TAAATAAGCC AGTGAAAAAA TTAACATCGC CAGCCATTAG 1430
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