EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-03190

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:202098940-202100420

Target genes

Number: 11
Name	Ensembl ID

RP11	ENSG00000224818
PHLDA3	ENSG00000174307
CSRP1	ENSG00000159176
IPO9	ENSG00000198700
SHISA4	ENSG00000198892
TIMM17A	ENSG00000134375
RNPEP	ENSG00000176393
ARL8A	ENSG00000143862
LGR6	ENSG00000133067
UBE2T	ENSG00000077152
PPP1R12B	ENSG00000077157

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_03659	chr1:202098303-202100873	Brain_Angular_Gyrus
SE_04188	chr1:202090421-202105368	Brain_Anterior_Caudate
SE_05189	chr1:202090108-202105371	Brain_Cingulate_Gyrus
SE_06075	chr1:202089924-202105413	Brain_Hippocampus_Middle
SE_06955	chr1:202090102-202105301	Brain_Hippocampus_Middle_150
SE_08216	chr1:202090299-202105392	Brain_Inferior_Temporal_Lobe
SE_27253	chr1:202098468-202099517	Esophagus
SE_27253	chr1:202099623-202100559	Esophagus
SE_65583	chr1:202098625-202100642	Pancreatic_islets
SE_68276	chr1:202090479-202114936	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I202130

chr1

202099184

202102927

Enhancer Sequence

CTTCATCTCT GCTATGCCCT CTCTCCACAA AGCCCCCCTT GGAGGGAGTC CAGTGGTCTT 60
TCCTCTGTGA GCCCCAGGGC TTCCCAGCCT TTGTCACTCT GAGAGCTGCT CTTGTTCAGT 120
TTCTTAGAAT GGACTGTTTT GCCTGTAGAC GGCCCAGCTG CCTGCCCTGG CCTGCCCCCA 180
CCCAGCCCCC ACTGCACCAC CCTTCCCGCC AGAGCTCCCA CTGCCCCCGG CAGACCCTTC 240
ATGCAGCTTC TCCTGTGGGG TCTTGCCCTT GAAGTGCCAC TTCCCCCAGC CCCACCTCTG 300
GTCCCTTCCA GAGGGCACCC TTAGCCTTGT AGGTCCCTGG GAAGCTGGCA CAGCATCAAC 360
CAGAAGTGAT GCCTCAGCCA GGCCACCAGT CGCTCCCCGC CTGGGAGCTC AGCTTTCCTC 420
AGAACCACCC CCCCTGTCTG AAGCTCTGTC CTGGGTCCCA CCAGACTTCT GCCCACCAGG 480
CCTACCTACA GCATCCACAT GGGGCCTCAG GAAGGGCCCC GGGGGCCCAG GGATGGGCAG 540
GGGCAGGGTT TCCAAGCGCC TGGGGCTCCA TTCTCCTCTG TCCACCCACC CACACCCCTT 600
GGCCTCAGCC TGCCCTGTAC CCAAGCTTCC CTCCCCCTCT CCTGGGGATC TTAACGGCCT 660
TGTTCTCTCT CCCTGGCACC CACCCCCAGG GCGGGTGATG CCGCCAAGAG AGAGGGAGGC 720
CGTTGCTAGG TGATGGCGCC GCCATGCACA CACCCTTTGT GCTGGGGAGT GACACCCACC 780
CGTTTCTCAG CAGACCTGTT GCCACGGTGA CTGAAGCCCC CAGCTCTGTC TGTAGAAACT 840
TCAGATGGGT GGGGGAGCAG GTTGGAGAGG GGACCAAAGG CAGGCCTGTC GTGCTGAAGC 900
TCTTGGGGAC CGTTTCCTCG GCATTTCCCC AACTCCTTCT CCACCCCCCT GCCAGGCCCG 960
GAAGTACCAC CAGCTTCCTA AGGGATGCAG GAAGGGGCCG GGTGAACTGA GGTGAAGTCC 1020
AGGGCAGGGG AGTCAGACCC CTCAACATCC TGTTTAGGGG TCCTCCTCCA CAAAGGGTGC 1080
CCTCCACCTC TCCCTCCTGC TGGTTGGCCG GCTCAGAGAT GAAGGGGGAG AGATGGTGGC 1140
TCCAAGGCTC TGCCACCGCC ACCTCCCAAG CCTGCCAACG TGAATGGCTT GCAGAATCAG 1200
TCAGCAGGCC AGCGGCCTTG GGAAAGAGCC ACTGTCCTCG CAGCCTGGGC CAGCTGGGGG 1260
AACAATGTAG GGTTTGTTGC TTAGGGGTCC CAGGCTTGCG GGGGGGTTGG CACATGGTGG 1320
GCAGTGGACT TGAGCTGGGA TGGTCTGAGG GGGCACTGAC ACGCTCACCC GAGGGCAGAC 1380
TTCAGACCAG CCCTCAGATC CTGATGCCAG GTTACAGGGC TGAGGGGAGC CTGAAATCCA 1440
CTGGGTCTCC CTGCTCCACT TGGGAGTCAC CTTCTCATCA 1480