EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-02680

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:160604690-160605330

Target genes

Number: 12
Name	Ensembl ID

PEA15	ENSG00000162734
RP11	ENSG00000227741
DCAF8	ENSG00000132716
PEX19	ENSG00000162735
NCSTN	ENSG00000162736
COPA	ENSG00000122218
F11R	ENSG00000158769
USF1	ENSG00000158773
NIT1	ENSG00000158793
UFC1	ENSG00000143222
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_14605	chr1:160597136-160605413	CD4_Memory_Primary_7pool
SE_17490	chr1:160595186-160605466	CD4p_CD25-_CD45RAp_Naive
SE_17914	chr1:160590964-160618183	CD4p_CD25-_CD45ROp_Memory
SE_18278	chr1:160590659-160619197	CD4p_CD25-_Il17-_PMAstim_Th
SE_19140	chr1:160597781-160605501	CD4p_CD25-_Il17p_PMAstim_Th17
SE_30951	chr1:160591362-160605178	Fetal_Thymus
SE_60518	chr1:160576136-160655079	DHL6
SE_62055	chr1:160575586-160612324	Toledo
SE_62257	chr1:160575404-160656474	Tonsil

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I160621

chr1

160591446

160605374

Enhancer Sequence

TCAGGAGTGG GAGGAAGGGA GCCATCACTG AAGTGAACCC CTGGGAATTC TCACTTGACC 60
TTTTTGTTAG AACAAAGTAC AGCCTAATGG CATTTTCCCT CCCCCTCAAT GTGATTTATT 120
TCTAGTGGGG AATCTATTGC TTCACACTGT CCATCATGCC CCACTACATC CTATCTAAGA 180
CCACCTTGGG ATAAAATAGA AAATAAGAAT TTGCTTTTTA GGCCTCTTCT ACCAATATTG 240
TTAGGGCTCC ACTCGCCCTT CCTGATGTCC TTGACCTAAG TTGCTATTCT CCTGTCTCCT 300
ATCAGTGGAG TTTGCTGTCA ACTAATCCAC CATGGTTTTT AGTTGGCTTA CGTTGTTACT 360
TCCTAGACCT AAAAGAATGG CTTTTTAGTG GTGGGATTTC ATCTATCGTG ATGTGTGTGG 420
GAGGGTGTGT GTGTGTATGT GTGTGCGTGC GCGCGCGCGC ATGTACACGG GCGCATGGGT 480
GAGTGAGTGG GTGGGTGTGT AGTAAGTGCT TTTGTGTGTC TGAGATAGTG ATAGGTCCTC 540
AATTATAACC ATAGGCCTCA TCAATCTATC CCACTCTAAG GCCATGAAAT AGGCCACATA 600
AAAGGTAAAT TCTTGCTTAT TTAGCAACTA TTATAGGACA 640