Tag | Content |
---|
EnhancerAtlas ID | HS133-01844 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:85778910-85780990 |
Target genes | |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GFI1 | MA0038.2 | chr1:85778961-85778973 | TGCTGTGATTTG | - | 6.52 | Gfi1b | MA0483.1 | chr1:85778961-85778972 | TGCTGTGATTT | - | 6.62 | Spz1 | MA0111.1 | chr1:85778930-85778941 | GCTGTAACCCT | - | 6.14 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_02338 | chr1:85779001-85781956 | Astrocytes | SE_35266 | chr1:85778814-85781116 | HeLa | SE_37476 | chr1:85778651-85782014 | HSMMtube | SE_37964 | chr1:85778676-85783111 | HUVEC | SE_39280 | chr1:85778981-85781883 | IMR90 | SE_44427 | chr1:85778734-85788812 | NHDF-Ad | SE_44926 | chr1:85778780-85781497 | NHLF | SE_45615 | chr1:85778631-85789632 | Osteoblasts | SE_47178 | chr1:85778640-85783616 | Panc1 | SE_51850 | chr1:85778766-85781281 | Skeletal_Muscle_Myoblast | SE_63644 | chr1:85778752-85781348 | HSMM |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I085313 | chr1 | 85778851 | 85782866 |
|
Enhancer Sequence | CTTCATGCTA CCATATTGAA GCTGTAACCC TTACTACTGT CATTTAGTAG ATGCTGTGAT 60 TTGAATGTGT TCCCCAAAGG TTTAAGCATT GGAAACTTAA TCATTAAAAC AACAGTGTTT 120 GGAAGTGAGG CCTAAGAAGA AGTGATTGGG TCATGAGGGT GGTGCCTTCA CAAATGCATT 180 AATGTCATTG TCATGGGAGT GGGTTAGTTA TCATGGGAAT GGGTAGTTAT AAGGTAAGCC 240 TGATCCCTAG TGCCTCTGTC TTGTGCACTT GCTTCCGCCT TCCACCATGG GATGAACCTT 300 GTTAGATGCT GGTACCATGC TCTAGGACTT CCCAGATCCA GAATCATGAG CCAAATAAAC 360 TTCTATTGTT TATCATTTAC CCAGTGTGTG GTATTCTGTT ATAAGCCACA GAAAATGAAC 420 TAAAACACTA GATGAGGGCA ATGTTCATCT ATTTGGGAGA CTAGGGGTAG TAGAGGGGAA 480 ACGAAAGTCA CCCAGAATCA GAATATAGTA CAAAGGCCTA CTAAAAGATT CCAGGGTGGG 540 AAAGGAATAC CTTGGTATGG ATGTTAAGTA TATCAGATGT TAGTGGATAG AAGGACCACT 600 CCTGCACATG GTCCTTCAAA TGCTACTTGA ACACCCCAGG AAAGGGGAAT TCACTACTAT 660 TAGTTTAGAC TGACTATTAT CCCCATAAGC AATATGACCA AGTAAAACCA AAACAGCTGT 720 GCCTGCCAAG ATGAGCAGGA TGTACAAACA AAAGGAAACA GAAAAGAGGT ACTTCAGGAT 780 CCTAAACAAC TTTATGTTAC CAGAAGGTCA TGGGCATGCT ACAAAAAGGC AACTAGCTGT 840 TTTGGGATAC CAGGTGCCCA AGAGACTGCT CTAATTTTAG AAATAACACA GTGCTTACTA 900 AAGAGGTCCA GGACTCATGG GTCTGGAATG CAACGTTCTT CCACCCTCAG GCCGTGCATA 960 CTCATGTTCT GGTGTTGATT CTGCTCCAAT TATTTTCTGA TGTTGAGGGA GGGAGGACCA 1020 GACCACAGAA CTGGCATGTG CCTAAGGAAT CTGCCAAGAG TTATTAAATG ATAACTGAAA 1080 TAATAAATTA TTTAAATTTA CAGAGACTTG TAAATTTACA GAGTTGGTTA TGACCACTGT 1140 CTGATAGGCT AAGAGCTCAT TTTCACAGTG GCCTTGTGCT GATATCCTCT GACTCTCCAG 1200 ATCCATCCTC TGCCCTTCTC TGCCAGTTCT CTGCCCTAGA ACGCTGACCT CCTAGGCTGG 1260 AGGCATCCCC TGAGCCCCCA ACTGCATCTT GTGGTTGTGT TCAGCCAATG GGGAGCACCA 1320 GCAGATCAGA GTTAGGAGAG AAAGAGGTTA AGGTACTTCT TCTCTGCTCT CTGGCTGGGT 1380 CTGTGGCCCT GCCTTCTCTG TCTTATATTT TGCAGCACAA TTTTCTGTCC TTGTCCTGCT 1440 GGGCCTAGGA GTGCTGCTGA CATCTGTTTT CCGGGTGTCT TACCACCCCT TGTTTTTACC 1500 CTTAACACCC ATACTTCTGA AACAGACCTT CATTAAGGTC ATCTCTTTAT TTGAACCAAG 1560 TGGGAATGAA TTATATTTCC TAACAGACTC CTTGATACTA TTATATCTTG CCCTGCTAAC 1620 AACATTCCTT CTGTCTCTCC CAATTATTAT CAAGCCTGGA AAGAAGCAAA CCCCATGTTA 1680 CTGTCTTAGC ATTAACTCTA GGGGACCTCA TACCCTCATC TGGGTCCCCT GTAAACAAAA 1740 TGATGACTTT GCTCACATCC TTCCCTGGAA TTTTAAGCCT CTGTGGCCCT GTGAATCAGT 1800 ATTTATTCCA CTAGCTCCTT TTACACAGCT AGACTGTTGC TTGAAATCAG AACTTGTTTG 1860 GTTCCTGAGC TTTTCCTCCA TCAATGTGAA ATATGCAGTC TTTGTACCCT GGTGGGATAG 1920 AGGCACATTC AACCTATAGC ATATAGGGTC CTAGTTTAAT TTTGAATGGT CATCCTCTGA 1980 GTTCTTACCT CAAAGCCTTA GCTAATAAAT AAGCTTTCTT GTCCATGAGC AGGAATTTAA 2040 AGTTCCTGCT TTTAAAGTGC TTTTAAAGTG AGAAATGGGG 2080
|