EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-01606

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:46987640-46988930

Target genes

Number: 11
Name	Ensembl ID

PIK3R3	ENSG00000117461
LURAP1	ENSG00000171357
POMGNT1	ENSG00000085998
RAD54L	ENSG00000085999
NSUN4	ENSG00000117481
FAAH	ENSG00000117480
MKNK1	ENSG00000079277
MOB3C	ENSG00000142961
ATPAF1	ENSG00000123472
RP11	ENSG00000228237
KIAA0494	ENSG00000159658

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr1:46988512-46988527	AGGTCACCCTGCCCA	+	6.52
NFIA	MA0670.1	chr1:46987956-46987966	GGTGCCAAGT	+	6.02
SP2	MA0516.2	chr1:46988151-46988168	CCAAGCCCGGCCCCCTG	+	6.11
ZNF263	MA0528.1	chr1:46988171-46988192	CTCTCCTCCCCCAGCTCCTTC	-	6.76

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I046519

chr1

46985499

46989059

Enhancer Sequence

TATTATTGCA CTTATTACAT TATGATAAGT GCCACTAAAC AAAAGTAGAC TCAGTTCCTG 60
GCCCTATATA TAGTCTAATG GATAAAATGG AGATTACTCA AATAATCACA CATATATCCA 120
CGTAAAGGAG CAGGGGTGAA TGAGAAGTGC ACACGTCTCT GACCTCGAAG GGCTTACGGC 180
TAACAGGAGG GGCAATCTGA GGCTAGATTC AGGATCAATC TAGGGCAAGA CACAGCTCGA 240
TTAGAGGTCA GAGTTGGAGC TCAGAATGGG CCATGGCAGG ACTCAGTTTG GGGCAGGGCC 300
GGCTCAGTCT GTGACTGGTG CCAAGTCAGT CACAGTTTCA TTTCTAGCAC TGACTCACTG 360
TGGACTATTT AATAAGCTGC TAGGCTTCTG GGAACCTCTG TTTCATCATC TGTAAAATGG 420
GGAGGTCTCT GTCTACCCCC AGGCTTGTGG GAGTTGAGTG CGGTAATAAT GGAAGTGAAG 480
GATTAAGCTT CTGTTGCCAC CACTAATGAC TCCAAGCCCG GCCCCCTGGG GCTCTCCTCC 540
CCCAGCTCCT TCCAGGCCGG GGAGGCTGCG TGGCCCTCAC CCATGTCTCC CGCTGCGGGA 600
AACTGCCACC TCAGCCTGGG ATCCTTTCCA AGAAGAGTCT GGAGATTTCA CAAAGACCTC 660
TGAACAACAA AAGTTGCAGA AGCGATATTT CCTCCTGGGG TTGACCGCCC CGTGGCTCCT 720
TTATCTTGGC AGCCAGGCTT GAAGAGCTGT TCTTGGAAAG AGCCTGTGTG GGCGTGTGTG 780
GGTGCACGTG GGTGTGAGTG TGTGTACAAG CTGCTCTTTG TTGTTGGTCT CATCTAAGCG 840
GGACGATAGA CCCGCAGGCC TGGGTCCTTC CCAGGTCACC CTGCCCATCT CCTGGCCTCT 900
GCACAGCATG TGCTGGGCAG CCAGGAGGGA GGGAACACAT TCTTTTTTAC CTTAGGATTC 960
TCCTGAAGAG AACTCCAGAA CACAGGAGCC CCAGTGCTTC AGGAAGAATC CAGGGTACCT 1020
GAGGCAGAAG CTTCACGACA GGGGGCTGAG GCGGAAACTT GACGACACGG GAGATTAAGG 1080
GGAGGTAAAG GCAGGTGCTC ATCGGCCCGC CCCTCGCTGT CTCCTTAGCA TGCACAGCCC 1140
CTGTGGAGGC AGGGCCCGCG AGACGTCTGA AAGGTTCACC TCCTTCAGGT TTACCTTCAG 1200
TCTGCCCTCG GTAAGCTGCC TAGAAAGGAC CGCGCAGCCT GCAAGCCCCA GCCTGCCTCT 1260
TGGACTGTGG GCTATTGGAA AAGCCCTTCT 1290