EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS133-01497 
Organism
Homo sapiens 
Tissue/cell
melanoma 
Coordinate
chr1:43413300-43417000 
Target genes
TF binding sites/motifs
Number: 9             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
MEF2AMA0052.3chr1:43414434-43414446ACTAAAAATAGA+6.27
MEF2BMA0660.1chr1:43414434-43414446ACTAAAAATAGA+6.32
MEF2CMA0497.1chr1:43414432-43414447CTACTAAAAATAGAA+6.57
MYCMA0147.3chr1:43414028-43414040GGGCACGTGGCT-6.18
NR2C2MA0504.1chr1:43415014-43415029TGAGGTCAGAGGGCA+6.95
Nr2f6(var.2)MA0728.1chr1:43416427-43416442GAGGTCAGGAGTTCA+6.22
RARA(var.2)MA0730.1chr1:43415171-43415188TGACCTTAGGGTGACCT-8.36
TBXTMA0009.2chr1:43416983-43416999TAACATGTATGTGTTA+6.01
TBXTMA0009.2chr1:43416983-43416999TAACATGTATGTGTTA-6.04
Number of super-enhancer constituents: 40             
IDCoordinateTissue/cell
SE_01795chr1:43413274-43414277Aorta
SE_02447chr1:43414805-43416460Astrocytes
SE_04284chr1:43412074-43414391Brain_Anterior_Caudate
SE_05390chr1:43414707-43416429Brain_Cingulate_Gyrus
SE_05390chr1:43416630-43422108Brain_Cingulate_Gyrus
SE_06192chr1:43411423-43414448Brain_Hippocampus_Middle
SE_08269chr1:43411549-43414442Brain_Inferior_Temporal_Lobe
SE_10377chr1:43414592-43420061CD19_Primary
SE_11009chr1:43387831-43425728CD20
SE_13825chr1:43414724-43417463CD34_Primary_RO01536
SE_14471chr1:43395753-43414527CD4_Memory_Primary_7pool
SE_14471chr1:43414700-43422138CD4_Memory_Primary_7pool
SE_20345chr1:43414766-43416518CD56
SE_20799chr1:43414730-43416336CD8_Memory_7pool
SE_22754chr1:43415217-43416365CD8_primiary
SE_22754chr1:43416585-43422072CD8_primiary
SE_23189chr1:43414912-43415861Colon_Crypt_1
SE_26580chr1:43413263-43414486Esophagus
SE_26580chr1:43414679-43416464Esophagus
SE_33837chr1:43413180-43413869HCC1954
SE_33837chr1:43414630-43417352HCC1954
SE_34353chr1:43413256-43414398HCT-116
SE_36013chr1:43414709-43416491HMEC
SE_37191chr1:43404622-43414101HSMMtube
SE_37191chr1:43414563-43417036HSMMtube
SE_39883chr1:43414765-43416522K562
SE_39883chr1:43416567-43420030K562
SE_41038chr1:43405665-43414583Left_Ventricle
SE_41038chr1:43414730-43416507Left_Ventricle
SE_41620chr1:43413406-43414406LNCaP
SE_41620chr1:43414783-43415774LNCaP
SE_42796chr1:43411152-43414315Lung
SE_49782chr1:43413434-43414224Right_Ventricle
SE_50202chr1:43414810-43415792Sigmoid_Colon
SE_57417chr1:43415150-43415765VACO_503
SE_58561chr1:43388242-43430420Ly1
SE_60624chr1:43388552-43428820DHL6
SE_62392chr1:43388423-43425814Tonsil
SE_64094chr1:43414873-43416676HSMM
SE_64340chr1:43414814-43416461NHEK
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 4             
ChromosomeStartEnd
chr14341335543413598
chr14341372843413805
chr14341412643414217
chr14341571943416249
Number: 1             
IDChromosomeStartEnd
GH01I042929chr14339554143414526
Enhancer Sequence
CTGTATCACC TGAGCCTGGG AGGCAGAAGT TGCAGTGAGC CAAGATCATG CCACTTCACT 60
CCAGCCTCGG CAACAGAGTG AGATAAAAAA AAGGAATGGA ACCTGGGTCA TACCGTGTCT 120
GCAGCCAGAG TGACGAGAGT AGGGAACAGC ACATGCTAAT TGCCAAACAA AGAAACCTGC 180
CACTTTTCAA TTTGGCTTTT GGGCAAAGCT GGCTCTGTGA GTATCTGTTG TGCCAGACCA 240
GTGTTCATCC TTAGCCATTT ATCAAACCCC TGACGAGTGC TGGAACATCA GAGCTCTGAG 300
AGGTAAATAC AGCACCCCAC AAAACCCTCC ACTCCAAGCC CACAGGGCTG TCAAGGAAGG 360
ACCTCTGAAG TCAGGCAGAC TGAGTTCAAA TCCTGACTCT CCTAGGAGAG TCATGGCCTC 420
CCAGCTTGGC CAGCAACTGG GCTCAGGGTC CAGCACAGAG AAGCATTTCT CATGTCCCCA 480
CCCCTCACCC TCCCTATCCC ACCGCTGGGG GTCTCACGAC CCACAAGAGC CCTCCCTCTC 540
CCAGGAAGCC ATGGATGAGG TGTTAAGATT CAGGACCTCT CCCCCAACGC TCGGATGCCA 600
GATGGCCCTG GCCACATTGT ATAACTTGCC AAACACTGTG GCCTTTTGAC CCATGTCAGT 660
GTGTCAGCAT TGCGCTCCAG CCCCAGGGTT GGCCTGCAGC AGGTTCTCAA TCTATATTGG 720
CACAGGAAGG GCACGTGGCT ACTGCTACTC AGAGGCAGGG TATTCCTGGC AAGAGGAGGG 780
TCCCAGGGCT GGCAGACTCC AGATGTTGCT CCATCTTGTC CTCTTCCCAC AGCATCCCAC 840
ATGGGTTCCC CAGGTGCAGG GAAGCAGGGG ACGCAGGGCT TTCCAACTGC TTAGTCCACG 900
GCTCAAAGGA GTGGGGGAGG GGTTTACCTG AATCCATGAC AGCTCCCTTT TAATTTGTTT 960
TGTTGTGTTT CTTACTCATT TAAATGAACT TCTGGGCATT AAAAGAAAGA ACCTCAAGGC 1020
TGGGCGCGGT GGCTTACACC TATAATCCCA GCACTCTGGT AGGCCGAGGC GGGCGGATTG 1080
GTTAAGGCCA GGAGTTCCAG ACCAGCTTGG CCAACACAGC AAAACCCTGT CTCTACTAAA 1140
AATAGAAAAG TTGGAGCCGG GCACGGTGGC TCACCCCTGT AATCCCAGCA CTTTGGGAGG 1200
CAAGGCGGGC AGATCACGAG GTCAGGAGAT CGAGACCATC CTGGCTAACA CGGTGAAACC 1260
CCGTTTCTAC TAAAAATACA AAAAAAAAAT TAGCCCGGCA TGGTGGCGCA TGCCTGTAGT 1320
CCCAGCTACT CGGGAGGCTG AGGCAGGAGA ATGGCTTGAA CCCAGGAGGC AGAGCTTGCA 1380
GTGAGCTGAG ATCGCGCCAC TGCACTCCAG CCTGGGCGAC AGAGCAAGAC TCTGTCTCAA 1440
AAAAAAAAAA AAAAAGTACA AAAATTAGTG GGGTGTGGTG GCACATGCCT ATAATCCCAG 1500
CTACTTGGGA GGCTGAGGCA GGAGAATAGA ATCACTTTAA CCTGGGAGGC GGAGGTTGTA 1560
GTGAGCAGAT ATTGCACGAC TGCATTCCAG TCTGGGCGAC AGAGTGAGAC ACTCTCAAAA 1620
GAAAAAAAAA TAAGACAGCT TTGGCTGCAA TAAGAAAGAA AGAAGCTCAA GAAATTGCAG 1680
ACTGCTGTAA CATCGGCACT TGACAGGAGG CACCTGAGGT CAGAGGGCAG GTGCCCAGCC 1740
TAGCATACAA ACAAAAGCCA GGGTTGGGAC TAGAGTTGTT TGGTTTCCTA GCCTGGCATT 1800
CTACCCTCTG ACCGGTTCCA TCCTGCCAAG CCTTTTAAAA AAGAAGAGTG ATGGACTAAC 1860
AGTCCAAAAC CTGACCTTAG GGTGACCTCA AGCATTAAGT GCTCCTGAAG CCACTTCCTT 1920
TAAGCCTTCC AATGATATCA AGACCCTTGC ATGACTGAAC CTCCAGACAC CCCTGGTTGC 1980
CCTCGAGGCA GAAGGCACTC GCCAGTCTTC AAAGTAGAAC TGAGAGGAGG GGGCTGGTGC 2040
ATTTAGCAGC AGCAGCAGCA GCGAGCTGAG GCACCCTGCC AGAGGCTGCT CACACATTCT 2100
GATTAACCAC CATGAACAAG CTTTTGGGGA GCGATTACTC CCTTTTCACA GATGAGAAAT 2160
GAGAGAGAGG GAAAAGCGCA GAACCAGGGG ACTCTAGGCT TCAGGGAAGT TTCCAATTGG 2220
GGGTCTCTGA TGCCAAATTC TATGGCTTTC CTGCTTAGGT CCTCCCCCTT GTTTCCGGGT 2280
ACTGGTCCCT GAAGGAAACA AGGTTTCTAC CTGGTGCTTT CTATGTAGGT CAAATTCCAT 2340
AAAAGCAACT CTCTGAGCCT TGCCCACTCT GAGCTGAGAC AGCCCGGGCA CAGGCTCAGA 2400
AACCTTTGGG CCACTTTGCT GCATTTGCTA TAAGCCAAAG TTGGCAAACT ATGGCAGCTA 2460
AGAATGAGTT TTACATTTTT AAGTAGCTGG GGAGAAAAAA AAGACAATGA CTAATATTTT 2520
GTGATATGTA AGAATTATAT TAAATTCACA TTTCAGTGAC CATGAATAAA GTTTTATTGG 2580
AACACAGCCA CACTCATTTG TCTACAGCTG CTTTTGTACT GCAACAGCAA AGCTGAGTGG 2640
CAGGCCGAGA ACTACATGTC CAACAAAGCT GACAATATTT ACGCTCTATC TGGCCCTTTA 2700
GAAAAAAGTT GATCGGCCTC TGCTTTAAGC CCCACGTCCC CTGAGCTAGC TGCCCAGCAT 2760
TCTCAAAGCC TTCCAGGCAA AACCACATCC TCCCTAAATA ACCGAAAAGG TATGCATCCT 2820
ATTATGGAAT GTTAAATGTA AATGGCTCCT TGGCCATGTG TGGGTGTGGG GCCAGGATCT 2880
GGACCCTGGG GAAACTGACA CCCCTGAGAA GATACACATT TGGTGGTGAG ATGGGCAATA 2940
ATTCAACTAA GAGAACATTA ATTTGGTAAG ATTGGGCACA TGCAAAGTTC ACTGTCACTC 3000
TCAGCAGACA CATTTAAGTC CCAGCTCCTC CACTTGTGTG ACCTTAAAAA AGTCCTTTCC 3060
TGGCTGGGCA TGGTGGCTCA CGCCTGTAAT TCCAGCACTT TGGGAGGCTG AGGTGGGCGG 3120
ATCACCTGAG GTCAGGAGTT CAAGACCAGC CTGACCAACA TGGTGAAACC CCGTCTCTAC 3180
TAAAAATACG AAAAATTAGC TGGGCGTGGG GGGCGCGCGC CTGTAATCCC AACTACTCGG 3240
GAGGCTGAGG CAGGAGAATC ACTTGAACCC GGGAGGCAGA GGTTGCAGTG AGCCGAGATC 3300
GCGCCATTGC ACTCCAGCTT GGGCAACAAG AGTGAAACTC CGTCTCAAAA AAAAGTCTCT 3360
TCCTCTAAGC TTCAGTTAAT TCTCCATAAG AGAGGATCTT CTATGAATAA ATGATATTGC 3420
TAAGGAAAGA TTATGCCTGA ATGCATGCTC CCAACACTCT TCTAGTCAAT GGAAATTCAG 3480
CGATAAAACT ATACCAAATC CCTGCCTATG GAACTTGATA GGTTAGTTGA AGGCTGGGGC 3540
AGAAAATAAA TACATGTAAT ACATCAGGTG GTGAGTGGTA TGAAGAAGGT GATGGGGCTG 3600
CTATTTCTTA ATCATGGTGG GACATGCCTG TAATGAAGTA TTATGCAGCT ATTGGAAAGA 3660
ATGAAACACA TCTGTGTTTC ACATAACATG TATGTGTTAT 3700