Tag | Content |
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EnhancerAtlas ID | HS133-01497 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:43413300-43417000 |
Target genes | Number: 20 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MEF2A | MA0052.3 | chr1:43414434-43414446 | ACTAAAAATAGA | + | 6.27 | MEF2B | MA0660.1 | chr1:43414434-43414446 | ACTAAAAATAGA | + | 6.32 | MEF2C | MA0497.1 | chr1:43414432-43414447 | CTACTAAAAATAGAA | + | 6.57 | MYC | MA0147.3 | chr1:43414028-43414040 | GGGCACGTGGCT | - | 6.18 | NR2C2 | MA0504.1 | chr1:43415014-43415029 | TGAGGTCAGAGGGCA | + | 6.95 | Nr2f6(var.2) | MA0728.1 | chr1:43416427-43416442 | GAGGTCAGGAGTTCA | + | 6.22 | RARA(var.2) | MA0730.1 | chr1:43415171-43415188 | TGACCTTAGGGTGACCT | - | 8.36 | TBXT | MA0009.2 | chr1:43416983-43416999 | TAACATGTATGTGTTA | + | 6.01 | TBXT | MA0009.2 | chr1:43416983-43416999 | TAACATGTATGTGTTA | - | 6.04 |
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| Number of super-enhancer constituents: 40 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43413274-43414277 | Aorta | SE_02447 | chr1:43414805-43416460 | Astrocytes | SE_04284 | chr1:43412074-43414391 | Brain_Anterior_Caudate | SE_05390 | chr1:43414707-43416429 | Brain_Cingulate_Gyrus | SE_05390 | chr1:43416630-43422108 | Brain_Cingulate_Gyrus | SE_06192 | chr1:43411423-43414448 | Brain_Hippocampus_Middle | SE_08269 | chr1:43411549-43414442 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43414592-43420061 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_13825 | chr1:43414724-43417463 | CD34_Primary_RO01536 | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | SE_14471 | chr1:43414700-43422138 | CD4_Memory_Primary_7pool | SE_20345 | chr1:43414766-43416518 | CD56 | SE_20799 | chr1:43414730-43416336 | CD8_Memory_7pool | SE_22754 | chr1:43415217-43416365 | CD8_primiary | SE_22754 | chr1:43416585-43422072 | CD8_primiary | SE_23189 | chr1:43414912-43415861 | Colon_Crypt_1 | SE_26580 | chr1:43413263-43414486 | Esophagus | SE_26580 | chr1:43414679-43416464 | Esophagus | SE_33837 | chr1:43413180-43413869 | HCC1954 | SE_33837 | chr1:43414630-43417352 | HCC1954 | SE_34353 | chr1:43413256-43414398 | HCT-116 | SE_36013 | chr1:43414709-43416491 | HMEC | SE_37191 | chr1:43404622-43414101 | HSMMtube | SE_37191 | chr1:43414563-43417036 | HSMMtube | SE_39883 | chr1:43414765-43416522 | K562 | SE_39883 | chr1:43416567-43420030 | K562 | SE_41038 | chr1:43405665-43414583 | Left_Ventricle | SE_41038 | chr1:43414730-43416507 | Left_Ventricle | SE_41620 | chr1:43413406-43414406 | LNCaP | SE_41620 | chr1:43414783-43415774 | LNCaP | SE_42796 | chr1:43411152-43414315 | Lung | SE_49782 | chr1:43413434-43414224 | Right_Ventricle | SE_50202 | chr1:43414810-43415792 | Sigmoid_Colon | SE_57417 | chr1:43415150-43415765 | VACO_503 | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64094 | chr1:43414873-43416676 | HSMM | SE_64340 | chr1:43414814-43416461 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr1 | 43413355 | 43413598 | chr1 | 43413728 | 43413805 | chr1 | 43414126 | 43414217 | chr1 | 43415719 | 43416249 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I042929 | chr1 | 43395541 | 43414526 |
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Enhancer Sequence | CTGTATCACC TGAGCCTGGG AGGCAGAAGT TGCAGTGAGC CAAGATCATG CCACTTCACT 60 CCAGCCTCGG CAACAGAGTG AGATAAAAAA AAGGAATGGA ACCTGGGTCA TACCGTGTCT 120 GCAGCCAGAG TGACGAGAGT AGGGAACAGC ACATGCTAAT TGCCAAACAA AGAAACCTGC 180 CACTTTTCAA TTTGGCTTTT GGGCAAAGCT GGCTCTGTGA GTATCTGTTG TGCCAGACCA 240 GTGTTCATCC TTAGCCATTT ATCAAACCCC TGACGAGTGC TGGAACATCA GAGCTCTGAG 300 AGGTAAATAC AGCACCCCAC AAAACCCTCC ACTCCAAGCC CACAGGGCTG TCAAGGAAGG 360 ACCTCTGAAG TCAGGCAGAC TGAGTTCAAA TCCTGACTCT CCTAGGAGAG TCATGGCCTC 420 CCAGCTTGGC CAGCAACTGG GCTCAGGGTC CAGCACAGAG AAGCATTTCT CATGTCCCCA 480 CCCCTCACCC TCCCTATCCC ACCGCTGGGG GTCTCACGAC CCACAAGAGC CCTCCCTCTC 540 CCAGGAAGCC ATGGATGAGG TGTTAAGATT CAGGACCTCT CCCCCAACGC TCGGATGCCA 600 GATGGCCCTG GCCACATTGT ATAACTTGCC AAACACTGTG GCCTTTTGAC CCATGTCAGT 660 GTGTCAGCAT TGCGCTCCAG CCCCAGGGTT GGCCTGCAGC AGGTTCTCAA TCTATATTGG 720 CACAGGAAGG GCACGTGGCT ACTGCTACTC AGAGGCAGGG TATTCCTGGC AAGAGGAGGG 780 TCCCAGGGCT GGCAGACTCC AGATGTTGCT CCATCTTGTC CTCTTCCCAC AGCATCCCAC 840 ATGGGTTCCC CAGGTGCAGG GAAGCAGGGG ACGCAGGGCT TTCCAACTGC TTAGTCCACG 900 GCTCAAAGGA GTGGGGGAGG GGTTTACCTG AATCCATGAC AGCTCCCTTT TAATTTGTTT 960 TGTTGTGTTT CTTACTCATT TAAATGAACT TCTGGGCATT AAAAGAAAGA ACCTCAAGGC 1020 TGGGCGCGGT GGCTTACACC TATAATCCCA GCACTCTGGT AGGCCGAGGC GGGCGGATTG 1080 GTTAAGGCCA GGAGTTCCAG ACCAGCTTGG CCAACACAGC AAAACCCTGT CTCTACTAAA 1140 AATAGAAAAG TTGGAGCCGG GCACGGTGGC TCACCCCTGT AATCCCAGCA CTTTGGGAGG 1200 CAAGGCGGGC AGATCACGAG GTCAGGAGAT CGAGACCATC CTGGCTAACA CGGTGAAACC 1260 CCGTTTCTAC TAAAAATACA AAAAAAAAAT TAGCCCGGCA TGGTGGCGCA TGCCTGTAGT 1320 CCCAGCTACT CGGGAGGCTG AGGCAGGAGA ATGGCTTGAA CCCAGGAGGC AGAGCTTGCA 1380 GTGAGCTGAG ATCGCGCCAC TGCACTCCAG CCTGGGCGAC AGAGCAAGAC TCTGTCTCAA 1440 AAAAAAAAAA AAAAAGTACA AAAATTAGTG GGGTGTGGTG GCACATGCCT ATAATCCCAG 1500 CTACTTGGGA GGCTGAGGCA GGAGAATAGA ATCACTTTAA CCTGGGAGGC GGAGGTTGTA 1560 GTGAGCAGAT ATTGCACGAC TGCATTCCAG TCTGGGCGAC AGAGTGAGAC ACTCTCAAAA 1620 GAAAAAAAAA TAAGACAGCT TTGGCTGCAA TAAGAAAGAA AGAAGCTCAA GAAATTGCAG 1680 ACTGCTGTAA CATCGGCACT TGACAGGAGG CACCTGAGGT CAGAGGGCAG GTGCCCAGCC 1740 TAGCATACAA ACAAAAGCCA GGGTTGGGAC TAGAGTTGTT TGGTTTCCTA GCCTGGCATT 1800 CTACCCTCTG ACCGGTTCCA TCCTGCCAAG CCTTTTAAAA AAGAAGAGTG ATGGACTAAC 1860 AGTCCAAAAC CTGACCTTAG GGTGACCTCA AGCATTAAGT GCTCCTGAAG CCACTTCCTT 1920 TAAGCCTTCC AATGATATCA AGACCCTTGC ATGACTGAAC CTCCAGACAC CCCTGGTTGC 1980 CCTCGAGGCA GAAGGCACTC GCCAGTCTTC AAAGTAGAAC TGAGAGGAGG GGGCTGGTGC 2040 ATTTAGCAGC AGCAGCAGCA GCGAGCTGAG GCACCCTGCC AGAGGCTGCT CACACATTCT 2100 GATTAACCAC CATGAACAAG CTTTTGGGGA GCGATTACTC CCTTTTCACA GATGAGAAAT 2160 GAGAGAGAGG GAAAAGCGCA GAACCAGGGG ACTCTAGGCT TCAGGGAAGT TTCCAATTGG 2220 GGGTCTCTGA TGCCAAATTC TATGGCTTTC CTGCTTAGGT CCTCCCCCTT GTTTCCGGGT 2280 ACTGGTCCCT GAAGGAAACA AGGTTTCTAC CTGGTGCTTT CTATGTAGGT CAAATTCCAT 2340 AAAAGCAACT CTCTGAGCCT TGCCCACTCT GAGCTGAGAC AGCCCGGGCA CAGGCTCAGA 2400 AACCTTTGGG CCACTTTGCT GCATTTGCTA TAAGCCAAAG TTGGCAAACT ATGGCAGCTA 2460 AGAATGAGTT TTACATTTTT AAGTAGCTGG GGAGAAAAAA AAGACAATGA CTAATATTTT 2520 GTGATATGTA AGAATTATAT TAAATTCACA TTTCAGTGAC CATGAATAAA GTTTTATTGG 2580 AACACAGCCA CACTCATTTG TCTACAGCTG CTTTTGTACT GCAACAGCAA AGCTGAGTGG 2640 CAGGCCGAGA ACTACATGTC CAACAAAGCT GACAATATTT ACGCTCTATC TGGCCCTTTA 2700 GAAAAAAGTT GATCGGCCTC TGCTTTAAGC CCCACGTCCC CTGAGCTAGC TGCCCAGCAT 2760 TCTCAAAGCC TTCCAGGCAA AACCACATCC TCCCTAAATA ACCGAAAAGG TATGCATCCT 2820 ATTATGGAAT GTTAAATGTA AATGGCTCCT TGGCCATGTG TGGGTGTGGG GCCAGGATCT 2880 GGACCCTGGG GAAACTGACA CCCCTGAGAA GATACACATT TGGTGGTGAG ATGGGCAATA 2940 ATTCAACTAA GAGAACATTA ATTTGGTAAG ATTGGGCACA TGCAAAGTTC ACTGTCACTC 3000 TCAGCAGACA CATTTAAGTC CCAGCTCCTC CACTTGTGTG ACCTTAAAAA AGTCCTTTCC 3060 TGGCTGGGCA TGGTGGCTCA CGCCTGTAAT TCCAGCACTT TGGGAGGCTG AGGTGGGCGG 3120 ATCACCTGAG GTCAGGAGTT CAAGACCAGC CTGACCAACA TGGTGAAACC CCGTCTCTAC 3180 TAAAAATACG AAAAATTAGC TGGGCGTGGG GGGCGCGCGC CTGTAATCCC AACTACTCGG 3240 GAGGCTGAGG CAGGAGAATC ACTTGAACCC GGGAGGCAGA GGTTGCAGTG AGCCGAGATC 3300 GCGCCATTGC ACTCCAGCTT GGGCAACAAG AGTGAAACTC CGTCTCAAAA AAAAGTCTCT 3360 TCCTCTAAGC TTCAGTTAAT TCTCCATAAG AGAGGATCTT CTATGAATAA ATGATATTGC 3420 TAAGGAAAGA TTATGCCTGA ATGCATGCTC CCAACACTCT TCTAGTCAAT GGAAATTCAG 3480 CGATAAAACT ATACCAAATC CCTGCCTATG GAACTTGATA GGTTAGTTGA AGGCTGGGGC 3540 AGAAAATAAA TACATGTAAT ACATCAGGTG GTGAGTGGTA TGAAGAAGGT GATGGGGCTG 3600 CTATTTCTTA ATCATGGTGG GACATGCCTG TAATGAAGTA TTATGCAGCT ATTGGAAAGA 3660 ATGAAACACA TCTGTGTTTC ACATAACATG TATGTGTTAT 3700
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