Tag | Content |
---|
EnhancerAtlas ID | HS133-01494 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:43400340-43401340 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HES2 | MA0616.2 | chr1:43400403-43400413 | GGCACGTGCC | + | 6.02 | HES2 | MA0616.2 | chr1:43400403-43400413 | GGCACGTGCC | - | 6.02 | RREB1 | MA0073.1 | chr1:43401030-43401050 | CCCCACACCACCTCCCGCCA | + | 6.67 | SPIB | MA0081.2 | chr1:43401104-43401116 | CACTTCCCCTTT | - | 6.07 |
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| Number of super-enhancer constituents: 39 | ID | Coordinate | Tissue/cell |
SE_01795 | chr1:43401101-43403350 | Aorta | SE_04284 | chr1:43399877-43402347 | Brain_Anterior_Caudate | SE_05390 | chr1:43400269-43403582 | Brain_Cingulate_Gyrus | SE_06192 | chr1:43395065-43405505 | Brain_Hippocampus_Middle | SE_07319 | chr1:43400813-43402381 | Brain_Hippocampus_Middle_150 | SE_08269 | chr1:43400734-43404931 | Brain_Inferior_Temporal_Lobe | SE_10377 | chr1:43396392-43405534 | CD19_Primary | SE_11009 | chr1:43387831-43425728 | CD20 | SE_12470 | chr1:43400220-43403900 | CD3 | SE_12535 | chr1:43400610-43400723 | CD34_adult | SE_12535 | chr1:43400919-43401022 | CD34_adult | SE_12760 | chr1:43400801-43400901 | CD34_fetal | SE_13825 | chr1:43400382-43401443 | CD34_Primary_RO01536 | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | SE_19657 | chr1:43396427-43405202 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20345 | chr1:43395492-43405550 | CD56 | SE_20799 | chr1:43396312-43405729 | CD8_Memory_7pool | SE_22754 | chr1:43395674-43405513 | CD8_primiary | SE_23189 | chr1:43399749-43406265 | Colon_Crypt_1 | SE_23904 | chr1:43400276-43401158 | Colon_Crypt_2 | SE_23904 | chr1:43401192-43405387 | Colon_Crypt_2 | SE_25177 | chr1:43399941-43405213 | Colon_Crypt_3 | SE_26580 | chr1:43395721-43413249 | Esophagus | SE_29267 | chr1:43400819-43410293 | Fetal_Intestine_Large | SE_34353 | chr1:43395339-43412997 | HCT-116 | SE_35049 | chr1:43400682-43411164 | HeLa | SE_36013 | chr1:43400628-43405505 | HMEC | SE_39883 | chr1:43397369-43405479 | K562 | SE_41620 | chr1:43399645-43401236 | LNCaP | SE_50202 | chr1:43396219-43406255 | Sigmoid_Colon | SE_54088 | chr1:43400594-43405374 | Spleen | SE_55821 | chr1:43399761-43405450 | u87 | SE_57045 | chr1:43396858-43405413 | VACO_400 | SE_58561 | chr1:43388242-43430420 | Ly1 | SE_60624 | chr1:43388552-43428820 | DHL6 | SE_62392 | chr1:43388423-43425814 | Tonsil | SE_64340 | chr1:43397259-43405516 | NHEK | SE_67781 | chr1:43399761-43405450 | u87 | SE_68708 | chr1:43393050-43401454 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I042929 | chr1 | 43395541 | 43414526 |
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Enhancer Sequence | AGGCCCAATC CCGCCGGCTC CCAGCAGCCT CCGCAACCCT GGGTCATGTG TGAGGTGAGA 60 CCTGGCACGT GCCTGTTCTG AACGCTCCCA CCTCACATGC CCGTCCCAAG CTTAGGATTT 120 AAACACTTGA TGCTGCCACC ACCCCACATC CATCCATCAC CAGGTCCTCT CGATTCTGCC 180 TCCGAGTCTG TCCTACTTCT CTACCCAGGC AGCCTGCCCT GGGTCTCATC TGGATTCTGC 240 TCCCGACTCT TCCTATCCAC CAAAGTCAGA CCCCATTTCC CACAGTGAAC CACCCCTCAG 300 AATGCAGTCG GAGTCCTGCA CACCAAATGT GCCAGGCTCG GCCATCCACC CGCTTCTCTG 360 CTCCCTTCCC AGCCCAGTCT CTTCACCCAG CTGTGGAGTC TGGGTGGCGG CAAGCGTGTT 420 GAGGAGGGAG GAGCGGTTCT GGTTAGTTCC TGGGGGGACT GCCATGGTGT CGGCCAGCCT 480 AGAGCTGAGG GGCTACTACA GATCTCTGTC CAGGTGCCTC ACTGAGCCTA GAGGACACCC 540 ACCATGGAGA CCACCCTGGA GAAGCAGGTT GACTCTGGGC AGCTGAGATC CTTTGAACCG 600 GATGGCTTCT GGTACGCGAA GCTATTCCTC ACCCGGTGGC TCTCCTGGGG TGAGGGGGAG 660 GCCTGCCCAA GCCTAAGGAC ACCTGGGAAT CCCCACACCA CCTCCCGCCA GTCGAGGCAA 720 CTGTGGGTGA GACTACATGT CTGCCCATCT GCCAAGGAAC TTCTCACTTC CCCTTTGTAG 780 AGGGGCATGA GGCGGCGAAC ACTGCCTGGC ACATGGGTAA GCTGTTACTG CTGTCACTGT 840 TGCTCTCTCA AGAAAAGAAG TCACCACTTT CGGAGGAGCC TTAGGGACAA GGTTTTCCAT 900 TTTGAAATTG CCAGAAATCA TTACCCTAAG AATGTAAGAG TAAGGAGGAA CCTGAAGGAA 960 CTACGGGCCT GCCTCAGGGA ATAAAGCTAG TCTCCAGACC 1000
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