| Tag | Content |
|---|
EnhancerAtlas ID | HS133-01477 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:42345570-42346830 |
Target genes | |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NOTO | MA0710.1 | chr1:42345704-42345714 | GCTAATTAGC | + | 6.02 | | NOTO | MA0710.1 | chr1:42345704-42345714 | GCTAATTAGC | - | 6.02 | | RARA(var.2) | MA0730.1 | chr1:42346407-42346424 | TGACCTCTGTGTGGCCT | - | 6.57 | | ZNF263 | MA0528.1 | chr1:42346245-42346266 | GGGTGAGGAGAAGGAAGAAGA | + | 6.68 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_25331 | chr1:42325035-42352494 | DND41 | | SE_31241 | chr1:42345949-42349682 | Fetal_Thymus | | SE_39407 | chr1:42343671-42349793 | Jurkat | | SE_44017 | chr1:42346586-42349616 | MM1S | | SE_49913 | chr1:42336834-42349775 | RPMI-8402 | | SE_66323 | chr1:42343671-42349793 | Jurkat |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I041880 | chr1 | 42346235 | 42349511 |
|
Enhancer Sequence | TAGAGCTCTT CTTAGGTGCC TAGCATGGTC TTAAGTGCTT TATAGATACT GACCATTAAA 60
CCTCACCACA GTCCTATGAT GTAGATATTA TTAGTGTGCC CATTTTACAG ATCATGAGCA 120
TGAAGCCCAA AGAGGCTAAT TAGCTTGCCT GGGATCATCC TCTCTTTTTT CTTTTTTCTG 180
AGATGGGTCT CACTCTGTTG CTCAAGCTGG AGTGTAGTGG CGTGATCATA GCCCACTGTA 240
GCCTTCACCT CTCAGTCTCA AGCGATCCTC CTACCTCAGC CTCTTGAGTA GCTGGGACCA 300
TAGGCATGCC ACCATGCCCA AGTAGAGATG GGGGTCTCCC TATGTTGCCC AGGCTGGTCC 360
CGAACTCCTA GGCTCAAGCA ATGCCCCCAC CTCAGCCTCC CGAAGTGCTG GGAGATTACA 420
GGAGTGAGCC ACCATGCCTG GCCCATCCTC TTAATAAATG GTAGGGCTGA GATTTGAACC 480
TAGGGGCCTG ACTCAGGAGT GAGTACTGCT TACCAGGAAG GGAATGTGGT CAGCATGACA 540
ACAAAGGCAT CTCTGTCCTC CTTAAATGCA GCACCAACTC TGTAAACACA CAGCAGGAGC 600
TCTAGATACA CCACGTTTGT ACACATTTAC TGAGTCTACA TTTCCATGTC ACCTTCAGGA 660
AGAGTGGATT GGCTTGGGTG AGGAGAAGGA AGAAGAGCGG AGACTTCCGC CCTTGAGAGA 720
TTCTATTTTA ATTTTTAAGA AAACACTGAA CAGACCAAGC CCTGGATTTC AAGATCAGTT 780
TTCGAGGTCT CCAGACATGA GGCAGTCATC TGAAAAGGAA GACATGACAG AGGAGTCTGA 840
CCTCTGTGTG GCCTCCTTGC TCTCCCTGCA CTGCCTTCAG ATCTCCCAGT GAATAGGAAA 900
GGAGGGGAGA CCTGCATCTG TGGGGCGAGC ATCCCCTAAT CCTGATAGGC TTCAAAAGGT 960
TGCGAAAGGG GCCACATTCT CTAGTACTAA GACAATGGCA TTAAATCTAA ATTTCTTGAT 1020
AACCAAACTA AGGCATAAAG GCCAGTTAAC TATGTCTAGT TCTAATATAA CACTCTGGAA 1080
CATGCCCTGT GTTATCTTAG CCTAGCTTCC TAGAAATACT GAATCGCAAT ATTCCACAAT 1140
GCAAGTTCCT CCCACTAAAG GCCTCTTTGG AGAAAGGAGT TGGCTGTGAC AAAGGCTGTA 1200
GTATATAGAG GATGATCGTT ATGGTGGTGA TGACAACAGT GCTGATAGAT TAGACAATAG 1260
|
