EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-01115

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:32087190-32088690

Target genes

Number: 25
Name	Ensembl ID

SNRNP40	ENSG00000060688
ZCCHC17	ENSG00000121766
RP11	ENSG00000229044
PEF1	ENSG00000162517
COL16A1	ENSG00000084636
BAI2	ENSG00000121753
SPOCD1	ENSG00000134668
PTP4A2	ENSG00000184007
KHDRBS1	ENSG00000121774
TMEM39B	ENSG00000121775
KPNA6	ENSG00000025800
RP4	ENSG00000250135
TXLNA	ENSG00000084652
CCDC28B	ENSG00000160050
IQCC	ENSG00000160051
DCDC2B	ENSG00000222046
EIF3I	ENSG00000084623
TMEM234	ENSG00000160055
MTMR9LP	ENSG00000220785
FAM167B	ENSG00000183615
HDAC1	ENSG00000116478
TSSK3	ENSG00000162526
BSDC1	ENSG00000160058
RP1	ENSG00000254553
ZBTB8A	ENSG00000160062

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:32088627-32088648	TAATGGAAAATGAAAGTCTAG	-	6.08
NFAT5	MA0606.1	chr1:32088628-32088638	AATGGAAAAT	-	6.02
NFATC1	MA0624.1	chr1:32088628-32088638	AATGGAAAAT	-	6.02
NFATC3	MA0625.1	chr1:32088628-32088638	AATGGAAAAT	-	6.02
RREB1	MA0073.1	chr1:32088435-32088455	GCACAACTCACCCCCACCCC	+	6.18

Enhancer Sequence

CAGGTGAGGC CCACTCTGGG CAGGGGCTAG GCCAGTCACT GTGTGGGCTG GGGGTGGGAG 60
GGCTACTGGT CTAACTGAGT AGGCAGTCCT CTGCCATCAG CACATGCCAT CTTGGCTGCA 120
ACCAAAGAGA GGGGAAGCCC AGAGACACGT CAAACTCAAG GCCAAAAGCA CCAGTGGCTA 180
CCCTGGAATG GAATAGTAAC ACGTCCTTCT ATTAGTGGTT GGCGTTTATT GAAGTATCCA 240
CTCCCAGATA ATCTTGCATC CTCTTAGCCA CCATATATTA CCCACATTAA ATATATGAGA 300
AAACCGAGAC CCAGAAGATC AACATAACTT CCCCCAAACC ACTCAGCTAG TGAGTAGATC 360
AGGAACTAAA GCCCAGATCT GTGAGCTCCC ACTGCTCAGT TTAGTACCAC TGCAACAATA 420
ATAATAGCAA CTCCGTGGTG CTTGCCAAAT TAGGCACTTT GCATCCAATG TCTTAACAAC 480
TATCTAACAA AAGAAGCAAC ATTACCCACG TCACAAATGC CAAATAAGGG CAACCAACTT 540
GCCAGATTCA ACAGCAGCAG AGCCTTCTGG TTCCAGGGCC TGTCTTCTTT CCTGCATTAC 600
AGACTGACCC ACGGTGGGTT TCTTAGGTTT TTGGGGGGCA GGGGTGGTCA GAGGCCCTTG 660
GCCTAGCGAG TGGGAGTCCT GGATTGGCGT CTGGGCGGTG AGAAAAGGCA GGCCAGAACA 720
TGACCAGGCT CAGGAAGGGA CTCTCACACT TGGGGATGTC ACCTACATTC CACAGGAAGT 780
ACTGGCTTGC ACCCAGGCCA TGCCGGGCAG CGGATGGGGA CACGGACTGG CTGTGACCCA 840
GGTCCTGCCT TGGAGGAGCA CCCAGTCCAG TAGGACCCTT CCTGACTGGC CAGCCCTGTA 900
GTCCACCAAC ACTCATCATC TGCTCCCCAC AGACCCCCCA GCCAAGCAGG ACACAGGCAC 960
GATCCTCCTC ATTTGACAGA TATGAAAGCA AGGCTTAGAA AGGAAAATGA GGTGGCTAAG 1020
GTCACATAGC TCACGAATGG CTGAGCTGGC TCTAGACCCG CGTTTCCAGA ACTCCAGCCC 1080
CATGCCCCTC TGTGGTGGGT GATTTGAGTG TCCGGTGGCA GGAGAGGCTT CTCCAGGAGC 1140
CCAGAACCAC CCCAGGCTTA TGGGCACTGG CCCAGGCCAT TCGATGCTGC CCACCTGCTC 1200
ACCCCTTGCC CAGGCCTCCT CATAGTCTGG TATGATCCAG GGGAGGCACA ACTCACCCCC 1260
ACCCCTACCC TCAAAGATAG TGTTGGAGAT TTAGGGAGGA TGGATGGGCA GTTGACAGGA 1320
TGTGGCCTGG GGTCTTGTCA AGGTTCCCCA CCTCTTTGAG TCTTAGTTGC CTCATCTATA 1380
CCTAAGGACC AATAATATCT TTCCACAAGG CGTGTTGTAG AGGGTTTCAC AAAGAGCTAA 1440
TGGAAAATGA AAGTCTAGGC TGGGCGCAGT GGCTCACACC TGTATTCCCA GCACTTTGGG 1500