EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00962

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:28672190-28673540

Target genes

Number: 26
Name	Ensembl ID

MAP3K6	ENSG00000142733
GPR3	ENSG00000181773
PPP1R8	ENSG00000117751
C1orf38	ENSG00000130775
RPA2	ENSG00000117748
SMPDL3B	ENSG00000130768
XKR8	ENSG00000158156
AL512288.1	ENSG00000240750
EYA3	ENSG00000158161
RP5	ENSG00000228589
DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766
MED18	ENSG00000130772
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
TRNAU1AP	ENSG00000180098
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
GMEB1	ENSG00000162419
YTHDF2	ENSG00000198492
RP1	ENSG00000226852
EPB41	ENSG00000159023

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF9	MA0653.1	chr1:28673334-28673349	AGTTTCGCTTTTGTT	-	6.52
RREB1	MA0073.1	chr1:28673088-28673108	ATTTTTGGGGTGGGTTGGGG	-	6.38

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I028345

chr1

28672089

28673562

Enhancer Sequence

TGGTGGTACA CACCTGTAAT CCCAGCTACT CGGGAGGCTG AGGTGGGAGA ATCACCTGGG 60
CTCAGTAGGT TGAGGTTGCA GTGAGCCAAG ATGTCGCCAC TGCACTCTAG CATGGGTAAC 120
AGAGTGAGAC TCCATTTCAA ACAATAACAA CAACAACACA CACAAAGAAA ACATAAAACA 180
GAGAAAGAGT GTTGCTTTAG TAGGGGAGTA AGGATGTCTG GGATTTTCCA CCTTGCCTGT 240
GCCATGCTTG TTAGCCCCTG TGGCCAGTAT ATGAGTGTGA AGGAGGAGTC AGCCTTCTCC 300
ATCTCCTTTG AAAAGTGATC TCCTCTTTTT TCAAATGAGA AAGGATCCCC AGGATGCTTT 360
TAGGCAATGA CAGTTTCTTT TTTTTTTTTT TTGAGACGGA GTCTTGCACT GTCACCCAGG 420
CTGGAGTGCA GTGGTGCGAT CTCGGCTCAC TGCAACCTCT GCCTCCCAGG TTCAAGCGAT 480
TCTCCTGCCT CAGCCTCCCA AGTAGCTGGG ATTACATGCG CCAGCCACCA TGGCCAGCTA 540
ATTTTTTGTA TTTTTAGTAG AGATGGGGTT TCCCTATGTT GGCCAGGCTG GTCTCGAACT 600
CCTGACCTCA GGAGTTCCCA GCCAACAGTT TCTTGACAGA TCAAATATGG GGCCCAAGGA 660
TAAAGAACCA ACATTTAACT CTAGAGGCAG AGACAGGATG TGAGTCATCA CACTGGCCTT 720
TCGTCAAGTT GACTATAATT GTTTCTGTGT TTGTCCTCCG TGGTATGAAT ATGAACTGAC 780
AAGACTAATT TAGAAAAACA AACAAATATA TCAGAAGATA AACATTTAAA TAAGTAGTTT 840
CCTTCAAAGT ATTTATTTTG ATAAATGAAC ACTTTAGCAT TGTTCAAGTA ATCATTGGAT 900
TTTTGGGGTG GGTTGGGGAG ATGTCAAACA AATTGATTTC AAAATAGGTT TACGGTACTA 960
TTTTAGGTAT GGTATTTCTT GAAGAAAAAA AGTATACCCA TTACTCTTGC TAGGTTGGCC 1020
AGGCTGATCT TGAACCCTGG CCTCAAGTGA TCCTCCCACC TCAGCCTTCC AAAATGCTAG 1080
GATTATAGGC ATAAGCCACC ATGCCTGGCC CTAAAATGGG GTTTTTTTTT GTTTTTTTAG 1140
ATGCAGTTTC GCTTTTGTTG CCCAGGCTGA AGGGCAGTGG CGTGATCTCG GCTCCCTGCA 1200
ATCTCCACGT CCCGGGTTCA AGTAATTCTC TTGCCTCAGC CTCCTGAGTA GCTTGGATTA 1260
CAGGTGCCTG CCACCACGCC CAGCTAATTT TTCTGTATTT TTAGTAGAGA CCAGGTTTCA 1320
CCACGTTGGC GAGGCTGGTC TTCAACTCCT 1350