| Tag | Content |
|---|
EnhancerAtlas ID | HS133-00842 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:27174380-27175090 |
Target genes | | Number: 27 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr1:27174587-27174602 | GAGGTCAGGAGTTCA | + | 6.22 | | ZNF263 | MA0528.1 | chr1:27175068-27175089 | TTCCCCATCTTTCTCTCCTCC | - | 6.25 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_23384 | chr1:27173604-27174629 | Colon_Crypt_1 | | SE_23384 | chr1:27174699-27178454 | Colon_Crypt_1 | | SE_24351 | chr1:27174710-27177316 | Colon_Crypt_2 | | SE_26621 | chr1:27173970-27186608 | Esophagus | | SE_34526 | chr1:27174651-27176664 | HCT-116 | | SE_50491 | chr1:27174691-27177388 | Sigmoid_Colon | | SE_53016 | chr1:27174654-27177272 | Small_Intestine | | SE_57686 | chr1:27174839-27175963 | VACO_503 | | SE_64263 | chr1:27174693-27178982 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I026847 | chr1 | 27174110 | 27178056 |
|
Enhancer Sequence | AGGCCAGCAG TCTTGTAAAT GTCTCATATT CTAGATCTGA CTTTTTCCTC ATTGTGTTAC 60
TCACTTTGTT CCTCCATCTC CTGAACCTCC TGTAAACTGG GACATAGGTC TAGGCTTGAT 120
GAGATGCAAA TAAACCTCAC TGGCTGGGCG CGGTGCATCA CTCCTATAAT CCTGGCTGTT 180
TGGGAAGCCA AGGTGGGCAG ATCACCTGAG GTCAGGAGTT CAGACCAGCC TGGCCAACGT 240
GGTGAAACTC TGTCTCTACT AAAAATACAA AAATTAGCTG GGCGTGGTGG CACACTCCTG 300
TAATCCCAGC TACTCGGGAG GCTGAGGCAT GAGAATCGCT TGAACCTGCG AGGTGGAGGT 360
TGCAGTGAGC TGAGATTCAC GCCACTGTAC TCCAGCCTGG GCGACAGAGT GAGACTCTGC 420
CTCAGGAAAA AAAAAAAAAC CCTCACTAAG CTTTCTGGGA GTCTCCTTCT CTGACAGCCC 480
TTCTTAGAGT GGGTAAGGCC GGCAGGTGTA TGAACAGAGG CAGTCTCAGT ACATGGTGGC 540
AGTTCCTAAT ATTTGTCCCT GCCTTAGGCC AGACATTTTA CTCCAATGTT TGTTCCTGGG 600
AACCTGTTAC CCTGAGGCTT CTCCTGGACT GGCCAGGCAG CAGTAGCTTT CCCCTGCTGG 660
GGATCCGGGC CCTGGGCTGC CTTGGGCATT CCCCATCTTT CTCTCCTCCT 710
|
