EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00752

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:25893120-25893330

Target genes

Number: 26
Name	Ensembl ID

RUNX3	ENSG00000020633
SYF2	ENSG00000117614
RP3	ENSG00000261349
RHD	ENSG00000187010
SDHDP6	ENSG00000224183
RP11	ENSG00000259984
TMEM50A	ENSG00000183726
C1orf63	ENSG00000117616
SDHDP1	ENSG00000238084
RHCE	ENSG00000188672
TMEM57	ENSG00000204178
LDLRAP1	ENSG00000157978
MAN1C1	ENSG00000117643
SEPN1	ENSG00000162430
RP1	ENSG00000255054
FAM54B	ENSG00000117640
AL020996.1	ENSG00000223474
C1orf135	ENSG00000127423
PAQR7	ENSG00000182749
STMN1	ENSG00000117632
PAFAH2	ENSG00000158006
SLC30A2	ENSG00000158014
TRIM63	ENSG00000158022
PDIK1L	ENSG00000175087
ZNF593	ENSG00000142684
CEP85	ENSG00000130695

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_02010	chr1:25890927-25896559	Aorta
SE_03472	chr1:25890604-25897057	Brain_Angular_Gyrus
SE_04384	chr1:25883710-25897130	Brain_Anterior_Caudate
SE_05146	chr1:25875255-25899602	Brain_Cingulate_Gyrus
SE_05991	chr1:25873945-25899913	Brain_Hippocampus_Middle
SE_06990	chr1:25882590-25898188	Brain_Hippocampus_Middle_150
SE_08141	chr1:25882606-25897422	Brain_Inferior_Temporal_Lobe
SE_17633	chr1:25869448-25897028	CD4p_CD25-_CD45RAp_Naive
SE_19031	chr1:25874010-25893424	CD4p_CD25-_Il17-_PMAstim_Th
SE_53664	chr1:25874991-25896829	Spleen
SE_65397	chr1:25887914-25896024	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I025565

chr1

25891281

25897035

Enhancer Sequence

CCGGGGGTGG GTGCACCGCT GGCTGCCCCT GACTTTTCTG AGCTGTTTGA CTCTCAAGGG 60
GAGGTGCTTT GATCTGAGGT TACTCCACCT CCCCTGCACC GGGGGCTTCC TTCTTGGGCC 120
ATGTGCCCTG CTGTTCCCCA CTGGTGCCCC CTCGCGTCTG ACCCTGGGGC GCGCCAGCCC 180
TCACCCAGGC TCTCGGCTCA CACAGCTCTG 210