EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00742

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:25854260-25856320

Target genes

Number: 25
Name	Ensembl ID

RUNX3	ENSG00000020633
SYF2	ENSG00000117614
RP3	ENSG00000261349
SDHDP6	ENSG00000224183
RP11	ENSG00000259984
TMEM50A	ENSG00000183726
C1orf63	ENSG00000117616
SDHDP1	ENSG00000238084
RHCE	ENSG00000188672
TMEM57	ENSG00000204178
LDLRAP1	ENSG00000157978
MAN1C1	ENSG00000117643
SEPN1	ENSG00000162430
RP1	ENSG00000255054
FAM54B	ENSG00000117640
AL020996.1	ENSG00000223474
C1orf135	ENSG00000127423
PAQR7	ENSG00000182749
STMN1	ENSG00000117632
PAFAH2	ENSG00000158006
EXTL1	ENSG00000158008
TRIM63	ENSG00000158022
PDIK1L	ENSG00000175087
ZNF593	ENSG00000142684
CEP85	ENSG00000130695

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST	MA0138.2	chr1:25856217-25856238	GGCGCTGCCCATGCTCCTGCC	-	6.11
RUNX1	MA0002.2	chr1:25854395-25854406	AAACCACAGAA	-	6.32
ZNF263	MA0528.1	chr1:25856075-25856096	CTCCCCTCCTCTCCCTTCCCA	-	6.01

Enhancer Sequence

TTTGGGGTGA TGGAACTGTC CTGGCATTAG CTAGTGGGGA CGGTTGCACC ACACTGTAGA 60
TGTATGAAAA GCCACTGAAC GGTACACTTT AAAATAGTAA CATTATGTCA TGTAAATTAT 120
ATCTCAATAA TATTAAAACC ACAGAAAAGA AATAATAAAT AAATGATGGG GAATATTCCC 180
TTCCCCGCTA CAGAGTTATT CGCCCCCACC CAAGCACTGC CAGCCGCCCA CTAGAGTTTT 240
TGTGTTGTCA CTTCTTGTGG ACTGGTCTGT CTCCCCGGCC TTGGAACCCT TTGAGGGCAG 300
GGCGAAGCCG GGCTACCTCT GCTCCTCTCT GCAGCCCCAG GCCCTGGCGG GCAGGCAGCA 360
TCAGGTGTCC AGCCCGTGCG CTCTTGCCGT CACTCCCAAA GCTGTGCCCG TGCCCTCCGT 420
GTGCAGCTTG GGCTTGGAGC CTACAGGGAA CTGGTCTCAC ATCCGTTCCA TGACAGGGGT 480
GTCCTCCCCT CTCGGGTCTC CCCAGGCCCA TCTACTGCTG CCCCCAAGAC CCCATGAGAT 540
GCCCGGCGGG GAAGCCCTTG GCCGCCAAGC ATCCACCCCC TTCCATTCAG TGATGAGGAA 600
AGCCAGGGCC AGAGAGAGAG ATGGCCAGTG TCACACAGCA AGAGTAGACC AAGAGCCCAG 660
CCACCCAGTG CCCTCCTTGC TGCTGGCACG CCAGAGGACA GGCCCACAGG GCTGGGCAAG 720
CACCAGGGGA CCCCTGCACC AGGCAGATGG CCCGCCTGGT GTATGAGGAT GTGGAAGGAC 780
AGAGGGCTGG TTGGATCGGG AAGCTGAAAT CACGAGGGGA AGGTCCCAGT GCCATCCTTA 840
TTACACGCCA TGTTTTGATC ATGGAGACAG CCGTTACCAC AAAACCGCAG CCATGCCAAA 900
TTCATGGGCT TCCCTTTGCA AACACCCCTC CTCCCGCTCC AGGCTCACAG AACTGGGGTT 960
CCCGTGTCAG GGATGGGGCT GGACCCTGAG ATGAACCAGC CCTCTGGGAG CCATTGCGGC 1020
AGCCAGGACC GCAGCTCCCT GAGGCCCAAC CTTTCCCCTC TTCCAAGGGC TCTGTGTTCG 1080
TGCATTTATT GGGCACCCAT TGTGTGCCAG CTCCTATACC ACAGGCTGAG GTTAAGGGGA 1140
CAGCAAAACT GGCACAGGCC TTTCCTTCAT GGAGCTCACA GTTGAGGGGG AGACAGGCAT 1200
CCAACAATCC CACAATCAAG CTTTCCATCG CCACCGCCCA GACTGGTCAT TGTGGACACA 1260
CAGGGAACCA TGTGTGGGAG CCCTGCCCTG GCCTGGGGGC ACAGAGAAGT TTCTCTGATG 1320
AAGTGGGGCC TGAAGCGGGG GTTGGGGGGT AGCGGATGGA GGGCAGCCCC TCCCTCTGCT 1380
CTCCCAGCCT GCTGCCTCCC TCCGTGGAGT AGCTCCTGGG CATGGACCAG ATGGGGAGTC 1440
TGTGGGTTTT GTCTATAGTA TGTGCATGTG TGTGTTGTGT TGTGTGTTGT GTGTGGTGTA 1500
TTGTATGTGT GTGTGTTGTG TTGAGAATAT GCGTTTGTGT GTATGTATGT GTTGTGCCTG 1560
TATATATGTG TTGTGTGTGT TGTATGTTGT GTTTAGTGTG TGCATGTGTT GTGTGTTTGT 1620
GTGCTTTGTG TATGTTTATG TTGTGTGTAT GTGTTGTGTG TGTATTGTAC GTTGTGTGTA 1680
TAGTGCCTGT GTGTGTGGTG TGTATGTGTC ATGTGTGTGT GTTGCATGCA TGTTGTGTGT 1740
ATTGTGGGTC ATGTGTATAC TGTGTGTGCT GTGGTGCGCT GTGTGTTACG CAGTGCAAGG 1800
GGACAGCAGA GACAGCTCCC CTCCTCTCCC TTCCCAGCAG GGGAAGTGGC TTGGCGGTCA 1860
GGGAGGGGCT GTGGAGAGCC GGCCCCCCTG CTGGCACACC TCACCCACTG GAGCAGAAGA 1920
AGGAAGGGGT GCCCAGTCCT GTCTGCAGTG GGATGGGGGC GCTGCCCATG CTCCTGCCAC 1980
AGGACTCCTA CCCTGGCTCC ACCATGGGCC TCAGCAGGGG GGTCCCTTTC TTCATTTGTA 2040
GATGGAGGCG CCTACGGCAT 2060