EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00734

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:25526520-25528410

Target genes

Number: 24
Name	Ensembl ID

NIPAL3	ENSG00000001461
C1orf201	ENSG00000001460
SRRM1	ENSG00000133226
CLIC4	ENSG00000169504
SYF2	ENSG00000117614
RP3	ENSG00000261349
RHD	ENSG00000187010
SDHDP6	ENSG00000224183
RP11	ENSG00000259984
TMEM50A	ENSG00000183726
C1orf63	ENSG00000117616
SDHDP1	ENSG00000238084
RHCE	ENSG00000188672
TMEM57	ENSG00000204178
LDLRAP1	ENSG00000157978
MAN1C1	ENSG00000117643
SEPN1	ENSG00000162430
RP1	ENSG00000255054
FAM54B	ENSG00000117640
AL020996.1	ENSG00000223474
C1orf135	ENSG00000127423
PAFAH2	ENSG00000158006
PDIK1L	ENSG00000175087
ZNF593	ENSG00000142684

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr1:25526537-25526548	CTGCAGCTGTT	-	6.02
Tcf12	MA0521.1	chr1:25526537-25526548	CTGCAGCTGTT	-	6.62

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I025197

chr1

25523824

25527285

Enhancer Sequence

CTGAGCCAGC TTGATTTCTG CAGCTGTTAT GCACAACTCT TCGCCTTTAC AACCTGACAG 60
GCATTTGGAG ACAGTGCTGG CAGGCAGCAG GAATGTGAGG GCCCCCGCTC CAGCCCGAGC 120
CCTCAAGGAC CCTGGCCCAG TCTCTTTGTG CTACAGAGGC ATCCACCATA GTGCCCTGGG 180
ATGGCGTGCT CACAGGACGA CACGAGTCGA CATTCGCCCA AGCCAGGCAT GGCCAGGCTG 240
GCAAAGGCCT GCCTATCTGG GCCAGGTCTG TAGGGGAGAA GCATCTACGG GAGAAGGCCA 300
AGTACCACGT GGTATCCAAG CTCTGACAGG CAGGGAGTCA GGACAGATGG CAGGGGCACT 360
GGGAGAGGGT ATGCGGGCAC CTGGAGCTTC CGAGAAGAGC CTTAATGAAC AGGCAGGGCT 420
GAGAGGAAGT GTGGCTTGGT GGATGAGCAA TGCGGCTTTG GCAGCCGATA GGGCTGGATT 480
CGAAGCCCCA CCTTGCCACT CACAGCAGTG TGGTCTGGAA CCGGTAGCGT AAACCTCTGA 540
GCCTTTGCTC CCTTGTCTGG AGGGCAAGGA CCACCACAGT GCCCAGCCAT AGGGCTCTCA 600
CGCTCCGAAA ATCAGCTCCT GTGTGTGAAG TTTTCTCTAC GTGAGTGGAG TGGCTCTTTA 660
GGCTCCTGCT TGGTGTGTGT TTGTTTGTCT GTTTGCTTTT TGAGACAGGG TCTCTCTCTA 720
TCATCCAGGC CAAGGCTGGA GTGCAGTGAC GTGATCATGG CTCACTGCAG CCTCAACCTC 780
CCAGGCTCAA GTGTTCCTCC CACCTCAGCC TCCCAAGTAG CTAGAACTAC AGGCAGGCGC 840
CACCACACCT GGCTAATTTT TTTTACTTTT TATAGAGATG AGGTCTCACT ATGTTGCCCA 900
GGCTGGTCTC AAAATCCCAG CCTCAAGCCA TCCTCCTGCC TTATCCTCCC AAAGCACGAG 960
GATTACAGGT ATGAGCCACC ATATCTGACC CCTCTGCATC TTTTCTGCAT TTCTTGATCC 1020
TCCCACCTCA TCATATTTAG TCCCTCCTCT GTTACAGTTG TTTCTGGACT TGCCACTCCC 1080
CTGAGCCTCA TTCCATCCCA CACGGGCCTG CCCATCCAGT AGACCCCACT GCAGCTCCTC 1140
TGACAGTCAT GGCCATCAGC TTCCATGTTC ACCCTTCACC CACAGCGCTG GAGGTCGCCT 1200
GTCGGGAACA GGCTCTCTGG AGCCCTCCAC AAGATCCGGT CAACAGGTAA ACAAATCCCC 1260
GGGAATGTGT CCTCTGAAAC TGCCTCCTCT CCCTCAGTAA TGTGATCCTA AAGGCCTGTC 1320
CCACACCTTT TTCTCCAACA GCGTGGCCAA TTGAGAAATA GGGAGGACTT GAGGCCAAGG 1380
AAGGATCTAA TTACCAACAG CTTATGCTCA TAAGCCACCT ACCCATTTCA CCTTCCGCAC 1440
CTCCTGCAAA AAATGAGAGT GGGGGCTGTT GAGAACCAGG GGATGTCTTT CTATATGGTT 1500
TGGATGTTTG TTTGTTCCCC CCAAATCTCA CACTGAAATA TGATTCCTAA TGTCGGGGGT 1560
GGGGCCTGGT GGGAGATGAC TGGACCACCA GGGCAGATCC TTCATGAATG GGTTAACGAC 1620
ATCCCCTTGG TGATAAGTGA GTTCTTGCTC CGTGAGTTCA CATGAGTTCC GGTTCTTTAA 1680
AAGTCTGGAA CCGCCCCCCA ACCCCACTCT TTTGCTCCCA CTCTCGTGCC TGCTCCCCCT 1740
TTACCTTCCA CCATGATTGT AAGCTTCCTG AGGTCCTCAC CAGAAGCCGA GCAGATGTTG 1800
GCACCATGCT TCTCATACAG CCTGCAGAAC CGTGAGCCAA TTAAACCTCT TTTTATAAAT 1860
GACCCAGCCT CAGGTATTCA TTTACAGCAA 1890