EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS133-00708 
Organism
Homo sapiens 
Tissue/cell
melanoma 
Coordinate
chr1:25250910-25254060 
Target genes
SNPs
Number: 3             
IDChromosomePositionGenome Version
rs200872239chr125250917hg19
rs742230chr125251424hg19
rs760805chr125251923hg19
TF binding sites/motifs
Number: 6             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr1:25251740-25251758CCCTCCTTCCTCCCTGCC-7.01
IRF1MA0050.2chr1:25251180-25251201AATTACTTTCCCTTTTTTTCT+6.01
LMX1BMA0703.2chr1:25252990-25253001GTTTTAATTAA+6.14
RELAMA0107.1chr1:25251676-25251686GGGAATTTCC+6.02
TBX21MA0690.1chr1:25251406-25251416TTCACACCTT-6.02
TBX21MA0690.1chr1:25251786-25251796TTCACACCTT-6.02
Number of super-enhancer constituents: 15             
IDCoordinateTissue/cell
SE_11909chr1:25245250-25256528CD3
SE_15299chr1:25250753-25257810CD4_Memory_Primary_7pool
SE_15507chr1:25250856-25257883CD4_Memory_Primary_8pool
SE_16311chr1:25245979-25258054CD4_Naive_Primary_8pool
SE_16948chr1:25245747-25257805CD4p_CD225int_CD127p_Tmem
SE_17868chr1:25235585-25258091CD4p_CD25-_CD45ROp_Memory
SE_18972chr1:25241705-25256688CD4p_CD25-_Il17-_PMAstim_Th
SE_19286chr1:25236647-25257899CD4p_CD25-_Il17p_PMAstim_Th17
SE_20022chr1:25234379-25257824CD56
SE_20914chr1:25246045-25256551CD8_Memory_7pool
SE_21650chr1:25250879-25256602CD8_Naive_7pool
SE_22025chr1:25246912-25257900CD8_Naive_8pool
SE_22463chr1:25234579-25256550CD8_primiary
SE_32625chr1:25249533-25256589GM12878
SE_62407chr1:25236597-25293990Tonsil
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr12525163125252076
chr12525212425252306
Enhancer Sequence
AAACAAGGGT TTTTTTTGTA CTTTTAATAT CTACTGAATT TTCCAGAAGG AAAGACAGTT 60
CTTTTTTTTT TTTTAATTTT GTTCAGCGCT TTGCCAACAG GTGTTGACAA CTTCAGAAAG 120
TCATGGTATT GGCAGCAAGG CCAGGTTCAG ATTGAGCCCT GCCACCCTGC CTGTTCCCTC 180
TGCTGTGGGC TTCTGCATGG AGGGCATTCG TCCACCTCAT GGAGTCCTGT GGCCCCAACG 240
TTTACATATT CAAATCAGTG TTTTATTATA AATTACTTTC CCTTTTTTTC TCCATCATAG 300
CTATGGAATA ACATAGTTTG CAACTGCATG TAAATAGGTA GGTTTCATTA TTTATACATT 360
TCAACGTAGA ATAGTAAGGC TTGATATAAA ATATGTATTG TAAGAAAGGC TCCTCGTGTC 420
TGGCAGGGCA GGGACCTCAG CCCTAATCAC TGCAGGAGAC AGCAATGACC TGGTTTTCCT 480
CCCTTCCTTT TCTTGGTTCA CACCTTCAGC CCTGTTGTTA AGAGCTCTGT GGTGTTACTG 540
GGTGCGTGTC TTTCATGGAA AGCCATCTTC CTGGAATTCA GACAGAATGT AGAACTAAAA 600
ATTGAGGCAA CAAGCAGAGG TTTCCATCAG ACTTCTTAGT TCTGGCAGAA GTCAAGAGAC 660
CCAGGCAAGG GTTCTGGGTC CCAACCCCCA GTCTTAACTC CCAAAGTGTC CCATCTCCTA 720
AAGTGGCCCA GATTGTCACT GTCAACCACT GACTGTTCTC TCAGGTGGGA ATTTCCCAGT 780
CAGCAGGATG GGCACTGCAG ATGTGTGTCT GCATGCCAGC GGACCCGGCA CCCTCCTTCC 840
TCCCTGCCAA CCGCCTCCAC CTCTCCCACT CAGCAGTTCA CACCTTCTGG GTTTCCCCCA 900
CCCCCGCCCA AACCACACAG TAATCAGAGA ATCAGTGGCT GTCACCGCTC AAAGGGACCT 960
CAAAGTCCTC CTCCAGTCCC AGGCATTTGA AGTAACAAAA TCTCTAACAT GTATCCAGCT 1020
CTCAATATGC GCCAGCTGAT ACACTTGTGT CAATTTCCCT AACCTTCCCA AAATCTCATG 1080
AGGTAGGTAC CATTATCATC CCCATCTCAC AGATGAGGAA ACTGAGGCAC AGAGTGGTTA 1140
AGTCATTTGC CCAATGTCAT CCAGCAAGTC ATTAGCAGAG CTGGGACTCA AACGCAGGGT 1200
GGCTGATACT AGAATGCAGG CTCTCAAAGA CCTCGAGCCT CTGAAGGCTG AACGCCTTAG 1260
CCACAGTTCC TCAGACATCG GAACTCCTCC TCAGATCACT TCCTGCCTCC CAGGACCACT 1320
GAGACTGGTT ATGGACCTCT GAGAGGAGAT GGATGAGAGA ATGGTTTATA AACTCAGCCT 1380
CTTGCATCTC CCAGAGCCAC AGTCCCAGCC TCGGCCATTC CTGCTACAAG GACAAGCTCC 1440
CAACCAACGC CTTGGAAACC CATTTCCCTC CCTGCAGGCC TGGGGAGGGG GGCTCAAGGT 1500
CTGTGGGCAT GAAAACCCCT AAAAAAATCA TTCTCAGTGT GCAGAATGGC CAGACAAGGT 1560
CTCGGTAACT CAGAAAATCG TCGTCTCTTC TCTTTCTCTC GCTTCCCAGG AGAGAGAGTG 1620
GGAAGGGAGA ATCAAGTTCC TGATGCCTTG CTGGGCTCCC AGATCGACAG CACCTTCTGC 1680
CCGCCTCGCA ACAGGCAGCA GCTATAGTGC TCCTGACACA TACCTGGGCT AGCAGACCTG 1740
GCCACTGCCC CGCAGTCAGC AGAGCTCATC AGCCTTGTCT GCCACCGACC AAGGACCAGT 1800
GACTGTCCTC TCAGGGTTGG GATTAAGTCG CAAAGGGTTT GAGAGATTGG GGATGACAAA 1860
AGGGACTTGG AGACTAATTA GGAGCAGCAA TGAAAGCTTA ATTCATAAAA GCAAACATTT 1920
TCCATCCATC AACCTGCAAC CAGTTAAGGG CACCGTTTGA AAGAAATCTG TGTGTGGGGA 1980
AGGGAGCCAA CAGGAACAGG AAATGTTTGA AAGAATGTAA ACTATTTCAG TTTCATAAAA 2040
AGTAACAAGT AAACAGTTAT TACATGCAAA TAATGTCCTG GTTTTAATTA ATGCTGAAAA 2100
GTCAAAATAT GGCTGACATT TGTATGTATA CATCGAACGG CTGGAAAGGA AAAAATGGTG 2160
CCCAGATGCC TGTTTCAGAG CGGGGCTGGC AGCTCAGAGG GAACTAGAAC CTTGAGAAGG 2220
TCCTGTTTAT TGGTGATGAA AAGCACGGTT CTGCTTCAGC CACTTCAGCC TGCTGTGGAG 2280
TTGGGGAGCA GAGGGAACCC AGCTTACTTC TTAACAAAGC TAGAGGCGGG CCTGGTGCTT 2340
GGGAAGGGCG ACTCCCACTT CAGCCACTTC TCGTAGGCAG GCTGGTCTTA AAGGGCCAGT 2400
GGACCCTCAG GCCTCCGTTC CACAGGGGCA GGGTTTCCAG GACTTTCCCA TCCAGGAGTT 2460
AAGTGATGAT GGGTTTCAGG TCCCAGAAGC CTCCCATTCA ACAGCCCCCC ACCCCCGTCC 2520
CGCCTTCCTT CTGCTGCTCA AGGTCGGTCA GACAGGCAGG GTGGCACACC CGCCTTGACT 2580
CTGGGGCAGG AGATGGCAGC CTTCGAGCTG TGCTTTCCAA CATTCAGCTG CGTTAGCTTC 2640
CGTTCTAGAC CACCTAGGGC TCAAAGGCGC TGGGAAACTG GGTCTGGGAG ACCACAGCTG 2700
GAGAGACAGC CTCAGAGTGT GGGGGATATT CTGCCCCCTA TGGAGAGAGT GGCTGGGGTG 2760
CTTGGGCCCC ACAGATCAGG GACTTGTCCT GCAACCGCCT TGCTGAAAGA CCTATAAGCT 2820
CCCTTTTTGA GCTTGTTAAT CCACCATCTC CTGCCAGCAT TTTTTGTGAG ACCAGGTGTG 2880
CTTAACCGGG AAAGAGGGGG TGGCATGAAC GGTTTCAGGA GTTGGTAAAC CCTAGAAACT 2940
GGGAGAAAAT TGTCTTTTTC TGGCAAGAGA CCATAACTTT CCTCACCTCC TCAAAGCGAT 3000
CTGTAATATC CTACAGGATT ACAAATTGCT GTTTTTAGAC AGAGCTGCAT CTGGAGACCT 3060
GTTTTTCGGG ATTCTAAGGC CCCTCTTTCA ACCTCCTTCC CTGCTGCCCC TGCCATTGCC 3120
AATGCTGAAA TGGCGAGGCC TCCCTTCCAC 3150