EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS133-00495

Organism

Homo sapiens

Tissue/cell

melanoma

Coordinate

chr1:17763780-17764720

Target genes

Number: 6
Name	Ensembl ID

RP1	ENSG00000226526
MFAP2	ENSG00000117122
ATP13A2	ENSG00000159363
SDHB	ENSG00000117118
PADI2	ENSG00000117115
RCC2	ENSG00000179051

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:17764189-17764200	GCCCCGCCCCC	+	6.02
KLF16	MA0741.1	chr1:17764413-17764424	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:17764189-17764199	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr1:17764414-17764424	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr1:17764412-17764427	TGGGGGCGGGGCCAT	-	6.27
SP1	MA0079.4	chr1:17764186-17764201	CAGGCCCCGCCCCCC	+	6.65
SP3	MA0746.2	chr1:17764188-17764201	GGCCCCGCCCCCC	+	6.11
SP4	MA0685.1	chr1:17764410-17764427	TGTGGGGGCGGGGCCAT	-	6.39
SP4	MA0685.1	chr1:17764186-17764203	CAGGCCCCGCCCCCCCC	+	6.76
Zfx	MA0146.2	chr1:17764186-17764200	CAGGCCCCGCCCCC	-	6.19

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_57599	chr1:17764190-17765980	VACO_503
SE_68792	chr1:17759616-17766734	H9

Enhancer Sequence

TCTACACCCC AGGTGGAAGT TCTTGCTCTC TGGGGGTTAT CTGAGAATCT GGTGAAAACT 60
TAGACCCTCT TCTGAAAAAC ATATCCCACA CCACACCAAA CTTAAAGAAA GTTCTGTGGG 120
GGTGGGGAGA TGCTGTGGCG GCAGATGCCG GGTTCAGATC TCCGGCTCTG CAGGCTTTTT 180
CGGGAACGTT AACTTGAGTC AGCCACGACC TTAATTAAGA TTTGAGAAAA CAGAAGCCCG 240
CCCAGGACCC TAGGAGATGC TTCTTCACTT GGGGGGGCTA CAACAGAGCC CTCGCGAGCA 300
TCCTGCAGCT TCGGACCACC GGCGGCAAAC AAAGCCCGAG CACCGCTCAG CCGGGGGGCT 360
TCCCCGACCT CGGGGGAGGG CTCTGCGGAG CATGCGCGGC GGCCGTCAGG CCCCGCCCCC 420
CCCGGGCGCC GGAGCCGAGG CGGCGGGAAC CTCAAAGCCC CGGCGCAAAC GGCCGCTCCC 480
CGCAGAGCGC CGGCCGCCCC CTCCCCGCGG CGCCCGGGCG CAGCGGCGGC CACGGACGTG 540
TGGGGCCCGC TGGCCGCCCC CTCTTCCAGG CCGGGCGAAC TTACCGAGGT CCCCTTTCCC 600
GGGGCGGGGG GGGAGGGGCG CAGAGGGAGC TGTGGGGGCG GGGCCATGAC CCCCTCGTGC 660
GGGCTTCGGC CGCCCCTCCC CCGCCGCGGG CCCGGGCGCG CGCCCCAACC GCCAACCGCC 720
CGCGCGGTGC CCGGGGTCGG GTAGGCCGCG GGCCGCGCGC CCCGTACCGA GCCCTTTTGT 780
TGCGCGGAGG CGGAGGCAAT GATTCAGCCC GCGGCCTGCG CCGGCCCGGC CGCCGGGAGG 840
GAGCGTGACG CGAGGCGGCC CCCGGCTGGA ACGCGCGCCG TGCCGCGTCG CTGAGCCCGC 900
CGGCCCCGGC CCTGCGCCCA CCCGTCTACC CTGACCCTCA 940