Tag | Content |
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EnhancerAtlas ID | HS133-00254 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:9339390-9342940 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF4G | MA0484.1 | chr1:9339393-9339408 | GGAGAGCAAAGTTCA | + | 6.3 | KLF16 | MA0741.1 | chr1:9340448-9340459 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr1:9340466-9340477 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr1:9340484-9340495 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr1:9340448-9340458 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr1:9340466-9340476 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr1:9340484-9340494 | GCCCCGCCCC | + | 6.02 | RARA(var.2) | MA0730.1 | chr1:9339757-9339774 | AGGTCATGCAGAGGCCA | + | 7.09 | REST | MA0138.2 | chr1:9341495-9341516 | GGCACTGTGCCTGGTGCTGGG | - | 6.31 | SNAI2 | MA0745.2 | chr1:9341181-9341191 | TGCACCTGTT | - | 6.02 | ZNF263 | MA0528.1 | chr1:9342505-9342526 | CCCTCCTTTTCCTCCTCCTCC | - | 10.05 | ZNF263 | MA0528.1 | chr1:9342541-9342562 | TCCTCTTCCTCCCCCTCCTCC | - | 10.45 | ZNF263 | MA0528.1 | chr1:9342567-9342588 | TCCTCCTCCCCCTCCTCCTTC | - | 11.07 | ZNF263 | MA0528.1 | chr1:9342558-9342579 | CTCCTTGTCTCCTCCTCCCCC | - | 6.05 | ZNF263 | MA0528.1 | chr1:9342582-9342603 | TCCTTCCCCCTCCCCTCCTTG | - | 6.14 | ZNF263 | MA0528.1 | chr1:9341728-9341749 | GGAGCAGAAAGATGAGGAAAG | + | 6.18 | ZNF263 | MA0528.1 | chr1:9342588-9342609 | CCCCTCCCCTCCTTGTCCTCC | - | 6.54 | ZNF263 | MA0528.1 | chr1:9342577-9342598 | CCTCCTCCTTCCCCCTCCCCT | - | 6.71 | ZNF263 | MA0528.1 | chr1:9342517-9342538 | TCCTCCTCCTCTCCCTCTTTT | - | 6.75 | ZNF263 | MA0528.1 | chr1:9342571-9342592 | CCTCCCCCTCCTCCTTCCCCC | - | 6.82 | ZNF263 | MA0528.1 | chr1:9342511-9342532 | TTTTCCTCCTCCTCCTCTCCC | - | 6.92 | ZNF263 | MA0528.1 | chr1:9342538-9342559 | TCCTCCTCTTCCTCCCCCTCC | - | 6.98 | ZNF263 | MA0528.1 | chr1:9342529-9342550 | CCCTCTTTTTCCTCCTCTTCC | - | 6.99 | ZNF263 | MA0528.1 | chr1:9342523-9342544 | TCCTCTCCCTCTTTTTCCTCC | - | 7.16 | ZNF263 | MA0528.1 | chr1:9342594-9342615 | CCCTCCTTGTCCTCCTCCTCT | - | 7.5 | ZNF263 | MA0528.1 | chr1:9342544-9342565 | TCTTCCTCCCCCTCCTCCTTG | - | 7.63 | ZNF263 | MA0528.1 | chr1:9342532-9342553 | TCTTTTTCCTCCTCTTCCTCC | - | 7.76 | ZNF263 | MA0528.1 | chr1:9342526-9342547 | TCTCCCTCTTTTTCCTCCTCT | - | 7.83 | ZNF263 | MA0528.1 | chr1:9342502-9342523 | GCTCCCTCCTTTTCCTCCTCC | - | 7.98 | ZNF263 | MA0528.1 | chr1:9342570-9342591 | TCCTCCCCCTCCTCCTTCCCC | - | 7.98 | ZNF263 | MA0528.1 | chr1:9342591-9342612 | CTCCCCTCCTTGTCCTCCTCC | - | 8.22 | ZNF263 | MA0528.1 | chr1:9342508-9342529 | TCCTTTTCCTCCTCCTCCTCT | - | 8.4 | ZNF263 | MA0528.1 | chr1:9342564-9342585 | GTCTCCTCCTCCCCCTCCTCC | - | 8.7 | ZNF263 | MA0528.1 | chr1:9342535-9342556 | TTTTCCTCCTCTTCCTCCCCC | - | 8.87 |
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| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_00563 | chr1:9337903-9340328 | Adipose_Nuclei | SE_23490 | chr1:9337921-9342330 | Colon_Crypt_1 | SE_23818 | chr1:9337980-9341807 | Colon_Crypt_2 | SE_23818 | chr1:9341834-9342316 | Colon_Crypt_2 | SE_24876 | chr1:9337785-9342445 | Colon_Crypt_3 | SE_45049 | chr1:9340486-9342190 | NHLF | SE_50208 | chr1:9338047-9342398 | Sigmoid_Colon | SE_52461 | chr1:9338392-9340456 | Small_Intestine | SE_65576 | chr1:9339233-9340062 | Pancreatic_islets | SE_65576 | chr1:9340212-9341781 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr1 | 9340275 | 9340412 | chr1 | 9339431 | 9341286 | chr1 | 9340488 | 9341044 | chr1 | 9341090 | 9342382 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I009278 | chr1 | 9338461 | 9342291 |
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Enhancer Sequence | ATTGGAGAGC AAAGTTCACA GGAGACTGAG GTGGGAGGGG AAGAAGCCTC TTCCTGCTCT 60 GAGAATCCGC ATGGGTCGCA GTGCTTCCCT TCCTCAGCTC CCCCACCGCA GGCTGCTAAA 120 ATGACCCCGA GTGCCTCAGA AATCTCAGGG CCACCGCAGC CTCTCCCCTC TCAGCCATGG 180 TTCGATTCCT CATAAATATT AAGACTTCAT GTGCTCCTGC GTGGATTTTC ACCAAGTCCT 240 AAAATGCAGT GTAGACGCTC CAGGGAAGAG GAAGCAAGTG ACATTCCTGG CCCGCTCTTA 300 CGCCACGAGC TCTGCAGACG CCGAAAGGTT GCTCACAGGA GGCGGAAAGT GCCAGGGGTT 360 GGGCCTGAGG TCATGCAGAG GCCAACTGTG GGCCGGGGTC CCAGCGGCAG CCTCCCCACC 420 GAGGGCTGTG TTGAACCCTG GAGAGAGAGG GCGAGAGAGA GAGAGCGAGA GAGAGAGAGA 480 GAGAGACAAA GCGAGCGAGA GAGAAAGCTA GCATGAAGGC TTGTTGGAGG CCTGACTCCC 540 CAAGGCCAGA CCCTAAGGCC TTGAAGGTCA GCCAAGAAGT TGACCAAGCC AAGAAGTCCT 600 GAGACTTGGA GCCACAGGGC CAGTGGGGCA CCATCTCCCC AGAACAAAAA CTGTACCCCA 660 AGAATTGAAG GGAAATATTA TTTTTACTCT GAAACGTTCT GGAGCAGAAT GCAAAATTCC 720 ATCCCTTTCA AATAGAAAAC ACAAGCTATT CACACTTGAG GTGGGTGAGG GTGCTTTTGG 780 GGAAAAGTTT GAGAGTCGCG TCCTGGGCAC TGGGCAATCA TCAGAGGGTG TCTCCCTCGG 840 GAGGGGTCCA GTCAGGCCTG GCTTCACGGG GATGGTCAGT GAGGCAGGGC TGGGCGATGG 900 GCGCCGGCTC CTCCTGGAGT CAACCTTTCA TTCATTCATT CATTCAGCAA ATGGCAGTCG 960 TGGGGTAGGC AGCCATGCAC ATGGCAGTCA AGGCCCTCCC TTTCCATTCC AGACTGTGAT 1020 TGATCCGTGC TCCCCTCCCC GCCCCGACCC CACTCCCCGC CCCGCCCCCA CTCCCCGCCC 1080 CGCCCCCACT CCCCGCCCCG CCCCCACTCC CCGCCCCGCC GCTGGCAGCG GGCAAGGACC 1140 CACGACTCAT CCCATGGCCT CCCTCTGGGT AAGTGCTTGT CGACTGAGTC AACGACTGAA 1200 TCAGCCGCGG TTGTCAGGGC TCAGCTGGAC TGAGCGCTGC TGCCTGTGGG CGTTTCCTCC 1260 TCATGTGTTT TTTATCAGCA GCAGCGGCTG CAGGGTCCCC GTGCTCAGGG GTTGCCTCTG 1320 TCGTGCTCAC TCTGCCCCGC GCTCTGTCCA CACCCCTGCT CCATCCAACT CGCAGATGGA 1380 GCGGTTTCCT TTGAGCCCCA GTCCTGTCCA AACACACATG GGTGCTGGGC TTTCCCTGTG 1440 GCACATTTTC TACCCTCTGT AGGCAGGAAA GAGCAAGCAC ATGGAGGCAG CCCTGTTGTC 1500 CTTGGCCTTT CCAGGACACC TGGGAGGAGA CAGCACCCTG TGAGGCTAAG AGCTGGACTC 1560 TGGAGTCAGA AAGGTCTGAG TTCAAATCCC ACCCCTGCTG CTGAGAGAGT GGCACAGGGC 1620 AGTTTCACCA CTGTGAGCTT GTTCCTCCTC TGTGAACTGA ATAATAAACC CTGCTTTCCA 1680 GAAAAGAGGC GCACAGAGAG GACTTTATCA TAGGGCCCAC GATGAGCTCC CGGGGTCCGA 1740 GCGAGAGACC CGCAGCACCA CTTGGTGGGG GCAGGGCCGT GTGTCTGCAT GTGCACCTGT 1800 TCATCTGCCC ACCGCAGGCT CTCACATACC AGGGCTTTGT CTTCTGCAAG GATGACCAAG 1860 ACATGGCCCT GCACTCAGGA AATGACAGGC AAGGAGCGTT CTCAGGGGTG GCAGATGTAG 1920 CGAGAGCACT TGGGTCGGAG CCACAGGGCT CTGGGCAGAG ACTGCGGTTC CGTGTTGGGG 1980 GAAGGAGGTT AGGGAGTCAG GAAAGATCTC CATCATGTGG GGGCCTTGAA TTAGAAGTTC 2040 AGCAAGTGCC ACAGACTGAT TTCACATCCC ACCACAAGTA TTTATTGAGC ACCTATTGTG 2100 TAATAGGCAC TGTGCCTGGT GCTGGGATAC ACGGGGTGGT AGCACAAAGG AAGACACTGC 2160 CCAGGGCTCC TGGCCTGGCG GGGACACAGA CAAGGGCCCA AGGGATGGCA GCCCCAAGGG 2220 GCAGGGCCAA GCTGGGCCAT GCGGAGGGTG CCGTGGGACT GCCTGGCAGG AGCATCTGTC 2280 CACCCTGGGG ATCAGTGCAG AACGTGATTC CATCCTGATG GAAAAGACGT TTCGGCTGGG 2340 AGCAGAAAGA TGAGGAAAGC GCTGCTGTGT GGCATGGGGC CAGCTGCTTC CCCTCCCTGA 2400 GCCTCGGTCT CCTCACCCAC AAGCGGAGGG ACTTGGAGCT CTGCTCTCTC AGGTTCTGGT 2460 GGCTCTGATG GGATGTGACA CCCATGACAT TCCCAGGAGC TGAGAGGATC TCCTGCTACT 2520 TGATAACCTG GAAGGCCCGT GAAAGCTTAG GGCTCTGTCA ATGTAGGAAT CAAGGCTGTG 2580 GAGGCAGATT AGCAGCAGTC CAGCCCCGAG CTGGGACCTG CTCAGCACGC CTCCTCTGCA 2640 CTGGCATTGC CTGCATGTCC AGGTCCTGCC ACAACTGCAC ACTCCACCTC CCAGCTCGAG 2700 CCCCGGGGCC CTCTGAGAGG AGGCAGAGCT TCTCTCTTGG TCTTTGCTGC AGCTCTGCAC 2760 CCTCCCCAGC CGGCCCAGGA GCCAGATGGG ACCCGGCCGA GCTGCAGAAC ACCGTGCACC 2820 TTCCTGCAGT CCTCAGCCTG GGACCTGAGG AGCACAGGCT GATGGCCTGA TGCGGCTTCC 2880 AGACAGAGCT CAGCCCACTC TTGGGAGGTG CCAGCTGCCT GGGTGGTCTG GTATCGGAAT 2940 GAAATCCAGA GGCCAGAAGG AGCCCAGGGT TCAAATTGCC ACCAATTTCC TGAAAGTTCC 3000 TCTAGAGCTC CGGGCAAACC CACCAGTTGA TTGCGGAAAA TAACAGACCC CTCACTTAAA 3060 ACCAGATGTC AGCATCTGTC TTGAACCAGC CCAGGGAGAG ACAGAGGCCC CTGCTCCCTC 3120 CTTTTCCTCC TCCTCCTCTC CCTCTTTTTC CTCCTCTTCC TCCCCCTCCT CCTTGTCTCC 3180 TCCTCCCCCT CCTCCTTCCC CCTCCCCTCC TTGTCCTCCT CCTCTCCCCC TTCCAACTCT 3240 GCAACCAGGT CAACCACAAC CTCTGGCCAC ACAACAGACC CTCTGCAAAG GAAACAACTT 3300 AGCTGGCACC TAAAAATATT GACTTGTGTT TTTCTTTAAA TAGAAAGGAA ACTCAGCTCA 3360 CTCCACCCCA GTGCTCCTCT TTCTGGATTC GAGTGGGCAC CCTGGGACCT CACCCAGACT 3420 CAGCCGCCCC CTCACTGAGC CACCTCGGTT TGGAGGGATG GAGCCATTCA GGATGGAGGA 3480 GGGAGTGGGG CTTGCCTGCT CCTGAGAAAG GTCTCCTGGG GCAGGGTGGG AGTGGGGCTG 3540 ACTAGATATC 3550
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