| Tag | Content |
|---|
EnhancerAtlas ID | HS133-00208 |
Organism | Homo sapiens |
Tissue/cell | melanoma |
Coordinate | chr1:8053440-8055080 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:8055052-8055073 | CCTTTCTTTCTTTTTCTCTCT | + | 6.06 | | IRF1 | MA0050.2 | chr1:8055011-8055032 | TCTTTCTTTCTCTTTTCTTTC | + | 6.36 | | IRF1 | MA0050.2 | chr1:8055022-8055043 | CTTTTCTTTCTTTTTCTTTCT | + | 6.3 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_36931 | chr1:8053555-8055284 | HSMMtube | | SE_45526 | chr1:8053715-8054342 | NHLF | | SE_45858 | chr1:8053627-8055254 | Osteoblasts | | SE_55872 | chr1:8053591-8054456 | u87 | | SE_67534 | chr1:8053591-8054456 | u87 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I007993 | chr1 | 8053216 | 8055004 |
|
Enhancer Sequence | GCATTCCTCT ATTAATGGAT TTCCCCCATT AAATTTTTTT ATTGCAGTAA AATACATACA 60
ACATGAAATG TACCATCCTA ACCATTTTAA GTATACGGTT CGGTGGTATT AGATACATTC 120
ATCCCGTTGT GCAAGCATCA GCACCATCCA TCTCCCGAAC TCTTTTTCAT CTTGTAAAAC 180
TGAGACTCTG TATCCAGTAA ACACTAACTT TCCTTCCCCC TACCCCTAGC CCCTGGCAAC 240
CACCATTCCA CCTTCTCTCT CTGTGAATGA GAGTACCCTC AGTACCTCCT CTCCGTGGAA 300
TCACATAGTA TTTGTCTTTC TGTGACTGGC TTATTTTACT TAGCAAATCA TCCTCAACGT 360
CCATGTTGTG GCATGTGTTA GAATTTCCTT CCTTTTTTTT TTGAGACCGA GTCTCGCTCT 420
GTTGCCCAGG CTAGAGTGCG GTGGTGTGAT CTTGGCTCAC CGCAACCTCC GCCTCCCAGG 480
TTCAAGCGAT TCTCCTGCCT CAGCTCCCAA GTAGCTGGGA TCACAGGCGC GCGCAACCAC 540
ACCAGGCTGA TTTTTGTATT TTTTGTACAG ACGGGGTTTC GCTGTGTTCT TCAGGCTGGC 600
CTCAAACTCC TGACATCAAA TGATCCGCCC GCCTTGGCCT CTGAAAGTGC TGGGATTACA 660
GGCGTGAGCC ACTGCCCCTA GCCCATAATT TCCTTCCTTT TTAAGGCTGA ATAAAATTTA 720
AGTGTATGTA TGTTCCACAT TTTGCTTATC CTTTCATCCC TTTATAGATT CTTGGGTTAC 780
TTCCACCTCT TAGCTATTGT GAATAATGCT GCTGTTAACA TGGTGTCCAC AGCTCTTCCG 840
GACCCTGCTT TCGATTCTTT GGGGTATACA CGCAGAAGTG GAATTGCTGA ATCATATGGT 900
CATTCTCATT GTGGTTTTGG TTTGCATTTT CCTAATGACT AATGATGTGG AGCATCTTTT 960
CATCTGCTTA TTGGCCATTT GTACATCTTA GATATGTCTA TTCAAGTGCT TTGCCCATTA 1020
AATTTTTTTT TCCAGGGGCC ATGCTAATAA TCTGTGTTGT TCCATTTTTA GTATATGTGC 1080
TACTGAAGTG TGCACTTTGC CCAGTTTTGA ATCGGGTTTT TGTTGTTGCT GCTGATATGA 1140
TTTGTTTTTT TTTTTTTTTG AAACAGAGTC TCACTCTGTC TCCCAGACTG GAGTGCAATG 1200
GCGCGATCTC AGCTCACTGT AACCTCCACC TCCCGAGTTC AAGCGATTAT CCCACCTCAG 1260
CCTCCCATGT AACTGGGATT ACAGGCATGT GCCACCATGC CTGGCTAATT CTTTTGTATT 1320
TTTAATAGAG ATGGGGTTTC ATCATGTTGA CCAGGCTGGT CTTGAATTCC TGGCCTCAAG 1380
TGATCCACTT GCCTCAGCCA CCCAAAGTGC TGGGATTACA GGCGTGAGCC ACTATGGTTG 1440
ACCCACGCAT AAGCCAACTT TAATGTTTTT CAATAAAGTT TTGTAATTTC CCCATTAAGC 1500
GTTTACACAT CTTTTGGATT TATTGTTGGT ATTATTAGGT CTGTCTTTTT TTCTTTCTTC 1560
TTTCTCTCTT CTCTTTCTTT CTCTTTTCTT TCTTTTTCTT TCTTTCTCTC TCCCTTTCTT 1620
TCTTTTTCTC TCTTTCCTTT 1640
|
