EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS131-00181

Organism

Homo sapiens

Tissue/cell

ME-1

Coordinate

chr1:26608090-26608770

Target genes

Number: 17
Name	Ensembl ID

PDIK1L	ENSG00000175087
CNKSR1	ENSG00000142675
RP11	ENSG00000236155
CEP85	ENSG00000130695
SH3BGRL3	ENSG00000142669
CD52	ENSG00000169442
UBXN11	ENSG00000158062
AIM1L	ENSG00000176092
ZNF683	ENSG00000176083
DHDDS	ENSG00000117682
RP3	ENSG00000223583
HMGN2	ENSG00000198830
RPS6KA1	ENSG00000117676
AL627313.1	ENSG00000243905
RP4	ENSG00000235069
RP1	ENSG00000226698
NUDC	ENSG00000090273

dbSUPER

Number of super-enhancer constituents: 20
ID	Coordinate	Tissue/cell

SE_09234	chr1:26600437-26620418	CD14
SE_11598	chr1:26601677-26620618	CD20
SE_14176	chr1:26601946-26609188	CD34_Primary_RO01549
SE_15660	chr1:26607834-26608735	CD4_Memory_Primary_8pool
SE_17222	chr1:26604570-26608249	CD4p_CD225int_CD127p_Tmem
SE_17706	chr1:26601754-26619073	CD4p_CD25-_CD45RAp_Naive
SE_18032	chr1:26601635-26619607	CD4p_CD25-_CD45ROp_Memory
SE_18600	chr1:26600628-26620343	CD4p_CD25-_Il17-_PMAstim_Th
SE_19301	chr1:26601729-26619077	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20500	chr1:26601922-26608563	CD56
SE_22719	chr1:26601924-26619047	CD8_primiary
SE_23529	chr1:26601993-26608669	Colon_Crypt_1
SE_26906	chr1:26601877-26608870	Esophagus
SE_31862	chr1:26601922-26609645	Gastric
SE_40404	chr1:26600567-26608639	K562
SE_41449	chr1:26600620-26613332	Left_Ventricle
SE_42616	chr1:26600690-26613056	Lung
SE_50183	chr1:26601943-26618863	Sigmoid_Colon
SE_52659	chr1:26601958-26608649	Small_Intestine
SE_53610	chr1:26604029-26608513	Spleen

Enhancer Sequence

CTGCTCTGTG GGAAGGGTGG CTGAGCTGTT CTCTTGTGAC TGTCACCTCT GTGTTTGTTA 60
GTGCATGTGT TTGGATATGT CTGACACACA AATACCTGTA TGGACCAGTG GTTTCTGGAG 120
ATGTCTGGGT GGGCCACCCT CCAGTTCACA TGCATGTGTC CATATCATGC TTGTGCCTTG 180
GTGTGTAGTG CACATCTCCA TGCCTGTCAG TGAGTGTGGC CATCCCATGC GCCTGTGTTG 240
GAGCACAATG GCTAAGAATG AGTGTATCAT GGGAGGTGGG TACCCAGCTG CAGTTCTGCT 300
AATTTGGGGG CATGGGTCTA GTGGCAAAAT GGCTTTGTGC GGTGTTGAAG TGTCCCCACG 360
AGTTGGTGGG TCTGTGCCTG TGCACAGGTA TCTGCTGGCT GCACACATAC ACAGTGAGGC 420
TCTGCTGTCC CAGCTGAGAA TGTAAACCCA GCTGGGGCCA GCTCCTTCCC CCCACTGCAT 480
CCCTCCCTTC ACAGGATCCA CTTAGCCCTT CTTGGGAGAA AGAGGAACCT AGAAGACAAA 540
GACCCAGCAG CCAGGCCCGC CAGCCGGGGC TCGAGTTACC AAGGGGCGGG TCGGCACCGC 600
CCCCTCCCTG GCCCAGCTGG TCCCAGGCCT TTCCTACGTG CCTGGCGAGA TGGCCCACCC 660
AAGAGCCTGG CGGAGCAGCG 680