| Tag | Content |
|---|
EnhancerAtlas ID | HS130-20653 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr5:39394940-39395870 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ZNF143 | MA0088.2 | chr5:39395225-39395241 | TACCCACAATGTATCA | + | 6.05 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_00308 | chr5:39392970-39402049 | Adipose_Nuclei | | SE_02513 | chr5:39393999-39396046 | Astrocytes | | SE_26080 | chr5:39394854-39396039 | Duodenum_Smooth_Muscle | | SE_37494 | chr5:39394121-39396229 | HSMMtube | | SE_45932 | chr5:39392784-39404167 | Osteoblasts | | SE_56138 | chr5:39394211-39396608 | u87 | | SE_63898 | chr5:39394153-39395159 | HSMM | | SE_63898 | chr5:39395207-39396004 | HSMM |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I039394 | chr5 | 39394302 | 39403530 |
|
Enhancer Sequence | TCGGAAAATT GCTTAACTAT AAAGGCAGTG ACTAGAGTAG AGTTATGACC TGTATCTTAT 60
TCACATTGAT AAATTTGTTT TAAGTATTAG GATTCTGCAT ATGATCCCCA GGGTTATCCA 120
AGCACTATAA AACACATCCT TTTTTGCCAT TAACACTTAT TTGTATCAGG GAAATAATGG 180
ATTGAGGGGG TTCCAATTGT GCAATTAATC TAGTACATTT TTATGCTATT ATTCAGCATC 240
ACCATACTCC AAACAGTCTG TCATGTGCTC TCACAACCTC TGCCCTACCC ACAATGTATC 300
ATAGTAGGAG AAACAGGAAA ATGCAGTCAT TGTAACCACG CAGAAGTGAG CTAACTTTCC 360
AAAAGGTTCT CTCACTTCCC AGGAGCCAAT GTTTCTATAT GCTGTAGAGA GAGCTAGGGC 420
GAGTAGATTA ACTTTCTACA TTGACTGATG ACCAAAGGCA AAGAAAAGCT ATTCATTGTT 480
TTGTAATCGT GTTAAGACAA CCTGTGGGCT GGCACACTAA CCCCTCCACA ACCCTGCCTT 540
CAACAAAAGC CCTCTTCATT CCGTGCCTAT ACCACCCATT TAAGTGAACA TTGTAACTGA 600
AGGACCAAGC CCACCACATG GGAATAACTG TCGTTTGTTA GATACTTAAA GAATATCTAA 660
ATAAAAAGTA AGTCTCAAGT TTTTACTCAA TTTAAATTGC ACTTAGCTTG TTTACAGATG 720
TCAACATGTT TTCATAGGGG TCAGTACTTA ATTTCTCCCA CTGTGAGTTT TAAAAGTCTT 780
TATAATCTGA ACAGTCTTTA AATACATACA TTCATGCAAT CTATGTATGA GTAATGTTAT 840
CTGAATTGCT TCATTTGGAG ATTTAGTAGT TAATTTTGCT CAAAGACACC TGGCTGGTTG 900
GCAACCAGGG AGACAGTCTG TTTACAGATG 930
|
