| Tag | Content |
|---|
EnhancerAtlas ID | HS130-20401 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr5:1535980-1537560 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr5:1537162-1537183 | TAACTCTTTCACTTTCACTTT | + | 7.89 | | IRF1 | MA0050.2 | chr5:1537168-1537189 | TTTCACTTTCACTTTTAGTTC | + | 8.78 | | PRDM1 | MA0508.2 | chr5:1537170-1537180 | TCACTTTCAC | + | 6.02 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_10974 | chr5:1535026-1540734 | CD20 | | SE_20226 | chr5:1535494-1538098 | CD56 | | SE_22635 | chr5:1535267-1538192 | CD8_primiary | | SE_42521 | chr5:1536339-1537152 | Lung | | SE_53481 | chr5:1536240-1537173 | Spleen | | SE_53481 | chr5:1537269-1537740 | Spleen | | SE_58838 | chr5:1470148-1537694 | Ly3 | | SE_61020 | chr5:1479068-1537765 | HBL1 | | SE_62644 | chr5:1479681-1537974 | Tonsil |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I001535 | chr5 | 1535657 | 1537888 |
|
Enhancer Sequence | TGATGTTAAT CTTCCTAATT GTGGTTTTCT TAGAGTGTAT CCTGCTTGTA GGTTTTCTGA 60
GATCCTTGAA TCTGAAAATG TACATCTTTC ACTACACTTG GGGACTTACC TGCTACTATA 120
TCTTCGGATT TTTTTTCTGC TACTTTTTTT TCTCATTTCT TCTTCTGGAG CTCCTATTAC 180
AGATATATAA GCCTTTTGAT ATTGTCCCAT AGGTTCCTGA GATTCTGTTC ATTTTTTTAA 240
AAATTTCCCT CTTTCTTCTT TATATTGAGC AATTTCAAAT GATCTGTCTT CCATTTTAAT 300
TCATTTGTCA TTGCCGTTCT GCTGTTAAGC CAACCCGGTA CATTTGTATT TTCAGATACT 360
GTATTTTTCA ATGTTAGTTT CTCACTGGGT TCTTTTTAGT AGTTTCTTTT TCTCTGCTAA 420
TATGTCCCAT CTTTTTATTT ATTGTGAGTG TGTTTTCTTT GCTCTAAGCA TAGCTGGAAT 480
GGCCGCCTTA CAGCCCACAT CTGCTGTCTC CGCACTGGCG CCTCAGGGCT TAGGTTGGTT 540
GGTTGTCCTG TTCTTTGAGA TTGGGTCACG TTTCTCTGTT CTTCATGTAG GACGTAGGAG 600
CCTCTGGGGT GCACGTTCTC GCAGTGAATG CTGGTGGTTT CCCTTTGGTG CTGTCTGGTT 660
GGGTCTGACT CACATGTGAA CTCTGTCTCC TGGGTGGCAG CCTCTGTTTT GGTTCAGTTC 720
AGTCCTTGGC TAAGCTGCTT TGGGTCACTC CACACCTGGT GATCCTGGTG TTAACCAGTG 780
ACGTGACATG GATAGAGCTT ATGTACAGAA TTTGGGGTTC CTCTTCATGT CTCTTCTCTT 840
TTTAGGGCTC CCCCTTACCC TTCAGTGGAT TTTCTGTCAT AGTGTTTGCC ACTCTGTGCT 900
GTTCTAACCT CTGGCTCAAA GCTACAAAAT GGGACAGTTC CCTGTGTATA TCTCTTCTTA 960
CAAGGTTTAC CTCCCATCCC CAATTTGCCA GCTTTTGTTC ATTCTCCAAG ATAGGTCATC 1020
AAAACATTAA AAAAAAAAAA AATTCTCAGG GATCTTGTCT AGTAGCAGCT TACACAGACA 1080
CAGCCAAAGT GCAAAACTCC AAACTTATGT TTTTAAAAAT GCCTGTTCTC TCTCCAGATA 1140
TCTTAATGCA CTTCACAAAT GTTTAAAAAA CGGAATCAAC TGTAACTCTT TCACTTTCAC 1200
TTTTAGTTCT CATCTAAGAT AAACTACCAT ATAAATTGAG TTGAAAATCC ACACTGATGA 1260
ACTATTTAAT AGGAAACAAT ATGGGTACTT GCCTACAATT TAGGCTTTTT CTGATTTCCA 1320
GAAAGGCTAC AAATGAAAAT GTTTGCTCAG ACGTTTACTT TGTACCTGAA ATAAGAAGGA 1380
TGTGGTCCAT CTGGTCACTG TGGCCCTGTT TGTGGTAGGG CTGGTGTCAG TATTCTAGCA 1440
TCAGCGGTGA CCTGGGTACT TTAACATGAA TTATCTTCTT GTTTATTAAC TCCATAAGGA 1500
AGTGTTAATC CCAGTTTTCA GAGGAGGACG TTGAATCTCT GCAGGTTGCA CAACACACCC 1560
CCAGGTGTCG GAGGAGGCCA 1580
|
