| Tag | Content |
|---|
EnhancerAtlas ID | HS130-17324 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr3:42113260-42114370 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr3:42114052-42114073 | TTTTTCTTTCTCTTTTTCTTC | + | 6.97 | | SPIC | MA0687.1 | chr3:42114067-42114081 | TTCTTCCTCATTTT | - | 6.42 | | ZNF263 | MA0528.1 | chr3:42114056-42114077 | TCTTTCTCTTTTTCTTCCTCA | - | 6.01 |
|
| | Number of super-enhancer constituents: 30 | ID | Coordinate | Tissue/cell |
| SE_00063 | chr3:42111769-42116338 | Adipose_Nuclei | | SE_01171 | chr3:42113085-42114211 | Adrenal_Gland | | SE_01796 | chr3:42111918-42116109 | Aorta | | SE_02512 | chr3:42113081-42114362 | Astrocytes | | SE_10226 | chr3:42113244-42115120 | CD19_Primary | | SE_10922 | chr3:42111661-42116689 | CD20 | | SE_23272 | chr3:42113215-42114155 | Colon_Crypt_1 | | SE_25861 | chr3:42111802-42115661 | Duodenum_Smooth_Muscle | | SE_26989 | chr3:42111884-42115599 | Esophagus | | SE_29565 | chr3:42111849-42116063 | Fetal_Muscle | | SE_36966 | chr3:42111843-42115859 | HSMMtube | | SE_38230 | chr3:42112222-42115124 | HUVEC | | SE_40683 | chr3:42112066-42116363 | Left_Ventricle | | SE_42248 | chr3:42111812-42115932 | Lung | | SE_44342 | chr3:42112142-42116402 | NHDF-Ad | | SE_44918 | chr3:42113191-42114918 | NHLF | | SE_45733 | chr3:42112002-42115320 | Osteoblasts | | SE_48185 | chr3:42111853-42116159 | Psoas_Muscle | | SE_48670 | chr3:42111819-42116288 | Right_Atrium | | SE_49555 | chr3:42113294-42114090 | Right_Ventricle | | SE_50309 | chr3:42111859-42115891 | Sigmoid_Colon | | SE_51166 | chr3:42111694-42116134 | Skeletal_Muscle | | SE_51885 | chr3:42112614-42114251 | Skeletal_Muscle_Myoblast | | SE_52625 | chr3:42111827-42115020 | Small_Intestine | | SE_53513 | chr3:42112178-42115564 | Spleen | | SE_54717 | chr3:42111792-42116671 | Stomach_Smooth_Muscle | | SE_62800 | chr3:42053253-42125059 | Tonsil | | SE_63663 | chr3:42112547-42114647 | HSMM | | SE_65044 | chr3:42113177-42114283 | NHEK | | SE_65769 | chr3:42112674-42115269 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH03I042069 | chr3 | 42111405 | 42116008 |
|
Enhancer Sequence | GCCATTCAGA GTGATGACAC ATGCAATGTG GGCTGCAGGC CATCCTGCTT CGGGACATCT 60
AACCCTTCTC AGGCAAAGTT TTCCTCTTCA AAGCAATAGC TTTTCAGCCT GGAGTCTCAG 120
ATTTCCAACA GGGATTTGGG ATGAGATTAC CACTCCTACC ACCCTTCCTG GCTTTGGCCA 180
GCCTCCAGAA TTCCTCCTGG TGTCCTGAGA ATGTGGAGAG AACCCTGCTT CAGGTTCTGA 240
TTTTCTGATT GGACGTTACA GTGGGGCATG TAATATCCTG CTGGGATGCC TCTCTGAGAA 300
CTGCCTCCAT CCTGCCAGCT GCCTGTCAGG CTGGCGTCGT GCCCCTTGGC TGGCAGTATT 360
AAGCGTCCGG AGGCCACTAT GTACCCAAAA CAGCAAGCCC GTTGGCCTGG TTTGCTGGAG 420
AAGCCCCTTT GCAGAGCAAT GTCCTGTGGT CACCATTCCT ACACTGGCCT GGGAGTGCTG 480
TCTCTCTCGG GAGTCGCCAG CCAAGTTTTG AATGTCTGAC TCAGCTTTTT GGGTCTTTCA 540
GGTGGTGCAT CTTCACTGGA CCTGGGCCAG CTGGTCTCAC TGAACTTGCT TTGTGCCGGA 600
AAGCTCTGCT CGTAAAGGTT CCATTGTAAA CGAAGGAGGA GGCCAGCTGT ACGCAGGCTC 660
TGCAGCTCAG CCTCTTAGCC TGGTTTCCTG TGGCAGGAGA GGGAGCTATT TATGGCATTT 720
TATAAATCTG CTGCCATCAG CCAGGGAGAG ATGCAGACCG TTATGTAAGG CTGTCAGTGT 780
GCAGCTTTTT TTTTTTTCTT TCTCTTTTTC TTCCTCATTT TGGGAGACAG GCGTGAGCTT 840
ACAGAAGGCA GCGTGGTTTG GGATTTCTTT TCTCTCAGTT GCAGCAGAAT TATTTTTGGA 900
AACGGGGATT TGGTCACATG ACAGCAGTTT TCATTCATGA GATGTGGATC GATTAAATGG 960
ATTTCTCTTT ACTTCATAGG TGTTTACTGA GGGCAGTGCA TGTGTTGGGG TGTTTGCTTC 1020
TGTCCTAAAC AAGGTTTAGA GAAGAGAGAG GGCTGGATTC TGGAACTAAA TTGGGTCAGA 1080
GTTATTTTTC TCCAGTTGCC TTGAGTTGTG 1110
|
