Tag | Content |
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EnhancerAtlas ID | HS130-15872 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr20:52351530-52356960 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Foxd3 | MA0041.1 | chr20:52353761-52353773 | AAACAAACAAAC | - | 6.32 | Foxd3 | MA0041.1 | chr20:52353765-52353777 | AAACAAACAAAC | - | 6.32 | MEOX2 | MA0706.1 | chr20:52353979-52353989 | AGTAATTAAC | + | 6.02 | ONECUT2 | MA0756.1 | chr20:52352655-52352669 | TTTATTGATTTTCC | - | 6.25 | ONECUT3 | MA0757.1 | chr20:52352655-52352669 | TTTATTGATTTTCC | - | 6.72 | RREB1 | MA0073.1 | chr20:52353097-52353117 | GTTGGGTGGGTGGGTGGGTG | - | 6.37 | RREB1 | MA0073.1 | chr20:52353101-52353121 | GGTGGGTGGGTGGGTGGAGG | - | 6.91 | SOX10 | MA0442.2 | chr20:52355774-52355785 | TGCTTTGTTTT | - | 6.02 | Stat6 | MA0520.1 | chr20:52355467-52355482 | ATTTCTCTGGAAAGA | - | 6.45 |
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| Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
SE_02719 | chr20:52351869-52357788 | Astrocytes | SE_09918 | chr20:52351874-52358747 | CD14 | SE_11687 | chr20:52350258-52359192 | CD20 | SE_32583 | chr20:52352012-52358445 | GM12878 | SE_32764 | chr20:52352063-52358427 | H1 | SE_33680 | chr20:52351683-52358704 | H2171 | SE_33830 | chr20:52350499-52358616 | HCC1954 | SE_43381 | chr20:52351923-52359910 | MCF-7 | SE_43747 | chr20:52351882-52358617 | MM1S | SE_44320 | chr20:52353172-52358315 | NHDF-Ad | SE_45892 | chr20:52351644-52357842 | Osteoblasts | SE_47103 | chr20:52347781-52361999 | Panc1 | SE_56172 | chr20:52351898-52358636 | u87 | SE_58495 | chr20:52322247-52381586 | Ly1 | SE_59791 | chr20:52322434-52378313 | Ly4 | SE_64370 | chr20:52351649-52358008 | NHEK |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I053733 | chr20 | 52350464 | 52358933 |
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Enhancer Sequence | AATAGTACTT ATCCTACCTA TATGTCATTC TATTCTATTC TATTCTAATT CCATTCCAAC 60 TAAAAGTAAT AGCCATGACC CACTAAATTG ATCTTACCAC CTACTGACAG GTCACAACCT 120 GCAGTTTGAA AAACACTTTC AATGCATATT TATTCAATGA AAAGGGACAA GTAGGCCAGG 180 CGCAGTGGCT CATGCCTGTA ATCCCAGCAC TTTAGAAGGC CAAGGTGGGA GGATCACTTG 240 AGGTCAGGAG TTTGAGACCA GCCTGGCTAA CGTGGTGAAA CGTCATCTCT ACTAAAAATA 300 CAAAAATTAG CCGGGCGTGG TGGCAGGTAC CTGTAATCCC AGTTACTCGG GAGGCAGAGG 360 CAGGAGAATC ACTTGAACCC GGGAGGTGGA GGTTGCAGTG AACTGAGATT GTGCCACTGC 420 ACTCCAGCCT GGGCAACAAG AGCAATACTT CGCCTCAAAA AAAAAAAAAA AAAAAAAAAA 480 GGAAAAGTAC TTATTTATAC TCCAATACTG TTCTGAACAT TTTGTAAGTA ATAACTTAAT 540 AATCCTTACA ATGACAGTGT GCCAGTGGGC TAAGAATTAT TATCTCTCCG TTTTCCAGAT 600 GATGAAACTG AGACACAGAG AGGTAGACAA GTTACCCAAG GTCACATGCT AGTATGTCGG 660 AGAGCTGTGC TTAAACCCCG GCGGTCTGGC TGCAGTTTAT GCTCTTAATC ATCAGCCTAT 720 GGTATTTCCT TTAGCCTTAG GAATTGATGT GAGACTAACC AGGTATTTAG CAATGCACAG 780 CTCTAAATAG CCTCTCCAGT ATTTCAAACC ACGGCAGGGC AGGTTCCTTT ACAAGATAGT 840 CAAACAGGAC ATAAGTGTAT TACTCTGCTA TTTATATACC TCCATGGCTC TAGAAGGCAA 900 ACAAAGACTC CTGAAATTTA ATAATCTCCT CCAGAAACTT AGCTTCAGCA ACACACACAC 960 ACATTCTCTC TCTCTGTGTC TCTCTCTCTC TCTCTCTCTG TCTCTCTCCA AAAGCCCCAA 1020 ACCTTCAAGC TCCCAAATAA TCAATGATGA CCACTCTCAG TGCTGGACTG AACGATAATA 1080 TTACAGTCAC TTCTTATTCA GAGGTAGTGC TCAACTTCCC CATTATTTAT TGATTTTCCC 1140 CCAAAGTTAT CAAGTTCTAA AGCCTAATTA TTGGTGTAAT AGCTGAGATG TTAAGAGAAT 1200 TGTAAGCCCC TTTAGCTAAT GCATGGCATA TGTTGAAGGG ATTCAGCTAA TTCACATATC 1260 TGTCTGCACT ATTAATAGAG AAGGTTACAT GCCAATTATC CAGGCTTCAA TCAGCCTGTT 1320 TGGATACAAT AGAGGCAGTG TTCACACACT TGATGTGCCA CATTCCTTCC CGACATCAGA 1380 AGCAGCTGGT CCAGATAAAG ACCGCTGGGG TTTTGATATT TAGGAATCAC GTCCACGGAA 1440 GAGCTGGAGT TGAGACTTGA TTGCTTCATG GACAAATTCC CTGCAGGTAT CTTTAACCTG 1500 GACTCTTTTG AAAAATGCCT AGTAGGTTTG CAGTTCACTG GGCTTTACAC TTTTCCTGCT 1560 CAGACTTGTT GGGTGGGTGG GTGGGTGGAG GTGCTGAGGA AGAGGAGAAA GACAAAGGAG 1620 CAAATAGCTC CAAGGACAAA GCAGGGAATA ATAGGAACGG GCAAATGGAT TCCAATAAAA 1680 TAAAGAACCC GCACACATTC TTGTGCCCAG TTTTAGAACC AAACAGGCTA AGACATTTTC 1740 CTCCTAAGAG CTCAACTTCG TGTGTTGAAA AATAGGTGGA TGGATAAATA TCTCTGTATA 1800 TTTCACCTGC ATTCTTTTCT TTTTATTTTT TTCCCCTTTC ATTTCTTTTT TTCCTCTGAT 1860 TCAGAAGCTG GACTGGAAGT GTTGTAATAT CATCAGAAAA TGCTGCTTCC GGTGGTATTT 1920 TTAACCAGGA ACAGAAGCTG AAGTGTCTGA AACCACCGGA GAAAGCCCCT GCTCTCCTGA 1980 GAGCTGTTCT CTAATTTTGC TGGCAGAGAG CATTGGATCA GTGATCAGAA AGTTAAAATG 2040 GCAGATGTTG GGGCTTCTAG GGGGAGGGGA GGCAGATACC TGATACTCTC CGGCATTTGT 2100 TTTTTTATCC TTCCCCTTAC CTTCCTTTCT CGGATCACAA TATCCTTCCC CTTACCTTCC 2160 TTTCTCAGAT CACAAAACAG AGCTGGCGTC CACTTTTCTA AGGTCACACA GCCAAATGCT 2220 GGCACAACAG TAAACAAACA AACAAACAAA AAACAACCAT CCCCAGGACC TGCCTCTCAG 2280 GCTGCATCCT GACCCTCCTG ACATTTCTCA AATACAGCAG CAGACCTCAA TACTTTTTAC 2340 AAAAATCACC AAAAGCTAAT CAACAACAGG CAGATAGCCC ATGTCAGCCG TTGTTTCATG 2400 TGCTATTTCA GCTCCGTGTG TATTTTTTCA CCCTCCCAGA TGAAAATACA GTAATTAACT 2460 CCATACAGAG GGGGGATGGA GGGAGGAAAC TCCCTTTTTT TTTTCCCTTC CCCTAGACTT 2520 GAAAAGAAAT TCTGGCAGAT AATTTGGCTG AACATGAAAA GGGAGAGGCT GCTTACAGCC 2580 GCCCAGATAA AGTGCTAGGT TGGTGAGGCT TTGCGGGCTA AGTTGGTTAT TTCACGCCAT 2640 GAAAAGCAGA CATTTATCTG TTCCCATGGA GATGTGATTT CTACTAGTCA ATCAGGCACT 2700 GGGGAGGTCA GACAATAGCC AGTGGTTCCC TTTTTCATCT CAAGAGACAG TCCATTCCTG 2760 TTCTATTGTA ACATTTCACC TACATTTAAA GGAATCTAAA TGATCTCTCC GAAATACCTG 2820 CAGACGCAGC CATTATATTT TCAAGTGATC AAAATTAGCA GACATTCCAG CTGCCTCAGA 2880 GGTAGACGGG GCGTGCCCCC CACCCCCCAG TTTCAGATCA TAGGTTGTTC CAGCACCATC 2940 CTTATTTGGA TAATTTTGGC TTCCACACTT GATCCTTCCC TCCTGAATAA AATAATAAGG 3000 TCATAAATTA CATGTTAAAA TTTGGGGAGT GGGCAGAGGA CTTCAAACAG AACATCGCGG 3060 GAGCAAGAGA ACGCTGCCCA GAAGAGAGCA AAGCCCAGAA CTACTGCAAG TTTGATAAAC 3120 TGTAAACTTT GTTCCCGGTC ACAGGACTGG GAACCGCCTG AAAACTGCAC ATGCAGAAAT 3180 GATTAGGGCT GTTATTTGAT CTTCAGTGTT TGCTATCAAT CCCAGAAAGC AGATCATGTC 3240 TATTTGCCAA ATATGTTTAT TTCAGTAGGT GAATTGCAGT GTAAGCACCT AGAAACTAGG 3300 ATTCACATAA GGACTTTGAA AATGATCTCC GAAGTGTCTC TTTTTCCCGC ATCATTTTCA 3360 CACATGCCTA AGGCAGAAGA AAACGTAACG GGGGTGGGGG GCCTTCTTCG AGCTAATTGA 3420 GAAGCAAGAG GCTATTTCCA TGGGATCCCA TTTGAAAACG CTGTCTGAGA GGCTTTTCCA 3480 ACTCTCAGAG CATATTTGAG ACGCAGACTG TCAAATGTGA CTTACACAGA AGGCCGTTCA 3540 CAGGATGGCA GCGTAACAGA AAACAGCAGA CAGGCAAGGC CATTAAGTAA CTTCATGCTT 3600 GTTAATGGGA GTCACTCAAG TGCAGCTCAA CTGCGCAAGG CAGGAAAGTA AACACAAATA 3660 CGACTCCTGG TTTGCCACAA GCCCGGCCTC TGTAGTGAGA GAGCTGTGAC TGCGTTTCCA 3720 GCTCCTTGAA GGCAGAGAGA CTCCTGCCTT TCGGGGCGGG CGGGCTGGAA CAAAGACACC 3780 AACGGGGCCA CCTCGGAAAG TCTTTTTGAG CAGTTTCAGC AAATAGCATT TAAGGGAAGG 3840 GAAAAAAACT CCAATGTACT CAATAAGGTA CAGTATAATA TCCCATTATT GAGGAGCCAA 3900 AAAGCAGGGA TTTACCGCAA ACGTTTTTGG GAGCTCGATT TCTCTGGAAA GACAGGGCAC 3960 GCATTTCTCA TGTATCGTGG GCCAGTATTT GACCATTTCC TGTGACCATT TCTTTACATA 4020 ATTTTCTCAG TTTAGTTTTT AAAAATTAAA ATAGAAGTCA TACCTAATCT CTTTAAAACG 4080 TTCAAACAGT ATAAAATTAA GGTAAAGGAG TTGAAGTTCC TCATTCCTTT TGCTCACTCC 4140 CACGCAGCTC ATGATCTCAC CAGAGATAGC TAATAACTAC TTTTTAACAG TGTGAAACAT 4200 ATTTTCCAGA CGTTTTCCAT AAAATGCACA TATACAAATA CACATGCTTT GTTTTAAATA 4260 CACCACTGGT ATCATATTTA TAGACACTGT TATACAACTT GCTTTTTTCA CTTTGAGTAT 4320 CGATCATGGA CAATTTCCAA TGTAGGTATT TTTCTAGTGA GCTATAAATT TTGGGGAACC 4380 ATGTCATACA TGCTCCTGGG GAAAATTCAA ATTATAGGGC TTGTGGGGAA GGGTGGGTCT 4440 CCCTCCTCCC CCGCAGACAA TGACTATTAG CAGTTTGTAG TGTCTCATGC CAGAAATAGT 4500 CCACGCATAG ATCAGCATAT ATGCATATCG AACGCTCACA CCTTTCTTTG TCTTTACACA 4560 AGTATCTTTC AGCTTGCATT TTCCACTTAA ATCTCTTGGA CAGCACTCTG TGTTAGAAAA 4620 ACTTGATGTT TTAAGTGGTG GCATAGTATT TCTTTAAATG GTATTCCTTA ATGTATTTCA 4680 CTTGCCCTTT TTCACAGACT TTTTGGTGGC TTTCAGTGTT TGCTTCTACA AACAGTGCTA 4740 CAATAAGTAG TCTGGTGTGT ACCCAGTGAT TCTCTGCTCA AACACACTCA CTCCTTTCTG 4800 AAAGCGACTC CTATTACACC ACACCTGTCC TAAAGTTGCT GTAATCCAAA GAAAAATGGA 4860 TCGAATTAAC TTTTTTTTTA AAACGAGGGT TTTAAGCAGA ACATTATTAA CCCATTAAAA 4920 ATCTGTGATA ATAAACTCGT GCCCTTTCCT GTGGTTTTTA GTCTCTCCTT CAGCTTGAGA 4980 GTAAGAGATT CATGAAAATG AAAAGAAAAA GTCTATCCCA TCCTCACCTC CTCATCCCCT 5040 ATCAGCCATG TCAAGATCAC TACATAGCAT CCCATGCCTG CTTATTACAA ATGCATACTT 5100 CACACTGAGT AATTCCTTTC CATCTACTCC TTTCATCTTG GGCTCAGAGA AAGATCGCAG 5160 CTCACGCTTA CAACTTAGGT GCAGACTTCT GCTCTTTTTT TGTGTGCAGG AGTAAAGCCA 5220 CTGGGGATTT AGAACAAAGT GTGTCCTTGG AAAGAAGTGG GTAGAATTTT GTGTGTGCAG 5280 TAGGTGGGGG AGGGAACCCC CTCCCGAGGG AGGAGTTCGA TTTCATTATA CAGTTGGAAA 5340 CCCGGTGAAA TCATGTATAC GACTGGATCT TTTCGCTCAG CGAGTGAGGT CTTTTTGTTC 5400 TTTGTCTTGC AGTGTGTACA GCAAATTTCT 5430
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