| Tag | Content |
|---|
EnhancerAtlas ID | HS130-15517 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr20:35578590-35579830 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF2 | MA0051.1 | chr20:35579277-35579295 | GGAAACCGAAACCTAAAA | + | 6.37 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_10153 | chr20:35574610-35581142 | CD14 | | SE_12376 | chr20:35578009-35580938 | CD3 | | SE_14715 | chr20:35577318-35581091 | CD4_Memory_Primary_7pool | | SE_15913 | chr20:35577659-35580743 | CD4_Naive_Primary_7pool | | SE_16626 | chr20:35577994-35581076 | CD4_Naive_Primary_8pool | | SE_17465 | chr20:35567878-35581102 | CD4p_CD25-_CD45RAp_Naive | | SE_21583 | chr20:35577710-35581114 | CD8_Naive_7pool | | SE_22190 | chr20:35577686-35581058 | CD8_Naive_8pool | | SE_23043 | chr20:35577910-35581182 | CD8_primiary | | SE_26470 | chr20:35577698-35581080 | Duodenum_Smooth_Muscle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | CTACAAACCA CTGAAACAGA GAGCCAACCA CATTTTGAGA CAGAAAATAT GGAACTACTT 60
CACTCCACTT GTTGCTAGTC AAAGAAAATA AAGTAATAAT CCATCCCAGC AGTGGAGGGA 120
AACGAAAGGG CAAAAGGGGG AAGAAAAAAA AAAAAGGAGA AATGCAATTT CCCATACCCA 180
TTCAAGCTAT CTTTGGGTCC TGAACCACTA ATGTTCCTCC TACCCCAGTT TCCAACCTAG 240
CCAAACAGGG CCCCACCTAA CAAATGCAAA AATTTACTAA ATTTGCAAAT CCCAACCACC 300
AAAGAATCAC CTTCCTATTG GACACCTAGA GGATATAAGG CAGGAGTCAA ATCTCACACC 360
CACCACAAAA AGTTGAGTAG AATTCACAAG GATGGATGCT TGGATACGAA TCAGTAAAAT 420
ATGATTAAAA CTCAACCTAA ACACTTCTCC AGGGGATGTG GCCAAACTGT GGCATGCTGG 480
GGATTCAGTG GTCAACTGAA CAACCCCAAG GTTCAGATTT TGGAGGGGAA CCTGCTTTTA 540
AAGAGCAAAA CATGTTCCTT ACCATGTTCT GCAAGTGCAG TCAACACACG CCTATCGGGC 600
GCTGCTGGGA TGCCAAGGAA GGTGATGGGA ATTCAGAGAT TAACCAAGCC AGTTCCTTCC 660
CCTTCAGGAA AAGCCTCAAT TCAGGGAGGA AACCGAAACC TAAAAGCCCC AGAACATCCT 720
CTGATGTGGC AAGTGTTCAA GGAGCTGCGG TTAGCGCGGA GGGGTCCCGC GAGCCTGGAT 780
GACAGCAAGC CGCCCACCAA GGTCTGGGGA AAAATCTCCT TCTAACTAAA AAAAAGGGAC 840
CCGAGTCTCG CTTGTCCCGC GCCGGGGTGG CAAGTTAGTG AAGAAACCCA CGAGAGTGAG 900
ATCCCAATCT ACGACTGCCC CTCCCAGGTC CTCAATCCCG GGAGCCTGCT CCCATCCTAC 960
GAATCGCCTA TCCCAGGCGA CCCCATGTCT TCTTCCTCCG CCTCGGGGAG TCAGTCCCGG 1020
GAGCCCCATG CCGCAGGCCC TCCTGGGAAC CCCCGCCGCA GGGCTCCCTC CCCCGCCTCG 1080
GGTCTTCCTT TCCTCGGCGC CCCCAGCGCA GGTCCGCCCT CCCGGGTGCC TCCCGCCGCA 1140
GGGCTCGCTC CTCGGCCTCG GTCCTCTCGT GGGGCCCCCT CCCTCAGGGC GCCTGGCCCG 1200
CGCCCCAGGT CGCCGCCCTT CGCCCCTCAG CCCCTCCGGA 1240
|
