| Tag | Content |
|---|
EnhancerAtlas ID | HS130-12544 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr19:19570080-19571150 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:19570119-19570140 | AGTTCCTTTCAGTTTTGATTT | + | 6.42 |
|
| | Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
| SE_01191 | chr19:19570230-19576031 | Adrenal_Gland | | SE_09215 | chr19:19566978-19576630 | CD14 | | SE_11973 | chr19:19568425-19574348 | CD3 | | SE_13867 | chr19:19568515-19572675 | CD34_Primary_RO01536 | | SE_14578 | chr19:19568459-19575548 | CD4_Memory_Primary_7pool | | SE_17284 | chr19:19568765-19573940 | CD4p_CD225int_CD127p_Tmem | | SE_17695 | chr19:19566792-19574795 | CD4p_CD25-_CD45RAp_Naive | | SE_18023 | chr19:19566743-19575441 | CD4p_CD25-_CD45ROp_Memory | | SE_18475 | chr19:19566771-19575554 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19438 | chr19:19568475-19574928 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20088 | chr19:19567076-19575380 | CD56 | | SE_21336 | chr19:19568398-19575234 | CD8_Memory_7pool | | SE_22348 | chr19:19566812-19575641 | CD8_primiary | | SE_24291 | chr19:19570902-19572043 | Colon_Crypt_2 | | SE_29832 | chr19:19568434-19576291 | Fetal_Muscle | | SE_31176 | chr19:19568500-19574330 | Fetal_Thymus | | SE_32371 | chr19:19570244-19576774 | Gastric | | SE_37262 | chr19:19568157-19578447 | HSMMtube | | SE_42846 | chr19:19570119-19576767 | Lung | | SE_45301 | chr19:19568572-19576209 | NHLF | | SE_50636 | chr19:19570162-19576180 | Sigmoid_Colon | | SE_53638 | chr19:19568432-19576267 | Spleen | | SE_55298 | chr19:19570192-19573831 | Thymus | | SE_69075 | chr19:19570946-19572163 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I019456 | chr19 | 19567324 | 19576824 |
|
Enhancer Sequence | AATCTACTCT TCAGAGATTA CTACCACTGA TTTTGGTCCA GTTCCTTTCA GTTTTGATTT 60
TAGTGAAGTT ACTTTCAGTT TTTTCCCTAT ATACACCTTT TTTTTTTTTT TAAACCATGT 120
AAATGGTACT ATGCTATTCT GCAACTTTTC TCCCACAGTT CTTTCCATTT TTCTTCACAT 180
AGCATTGTCT GTGAAGTAGG GATGGGAAAA CTGAGGCTCA GCTCAAGCAT CACTTGAGCC 240
CAGGTGTTTT GAGTCCAGCC TGGGCAACAT AGTGAGACCT TGTTCTTAAA GAAAAAAGTT 300
TGGGTTGACT GTTTAGAATT TGAGAGTCTC TATCTAGCAT GTGGCACAGA GGGTAGATAA 360
TTTAAGCTGC ATGGACATCT TTGATAAACA CTGTGGAAGA AGGGGCAGTG GCATCCTCTC 420
TTGGCCCACT GAAGCTTCTG TGTCCATCTT GTGTCCTTGG TCCTGTGGTT GATTGACAGA 480
CCTCTCCCCT GGCCCATGGC CAGCCAGCGT GTGTGTGATG GAGCTGAGAC CAAGTCTCTG 540
TTCCCTGCTG TGTCTAGTTG TAGGAGCTGA CTGCTTGGAA CACCTTTCTG TCTCTCAAGT 600
TAAGTTGTAT CTCTCGTACT TGGCCTTAAT GAAGTTTGAC ATTGAGAAGT CCAGAGCTGC 660
TGTTTCCGGT GTGGCTTCCT TCCGGAATGA GTCCTAGTCA CTGTTACTCA GAGATGTGCG 720
TCAGGAAGTG GCTCGGGCCA CAGTTCTGAG CAGATGGAGG TGTCTGTTCT GCATGGGAAA 780
GAAGTATGCT TGTCAGGCAG GCTCTGCCAA TGCCAAAACT TGGCCCACCT ATTCTCTCCT 840
TACCCCCTCA ACAGGTCCTT CTGGGCCACA ACAAGGTACC CTGGTTTGAC TCTTAGGAAG 900
TGGGAGAGCC ACTGAAGGGG GTACAGATCC AGGATGTGGC TTTGGGAGCT TCCTCGGGCT 960
ATGCTGCCGG GAGGAGAGTA GACAGGGGTT CTGGGTCCAG AGGCCCATCT GTGCTGTGCA 1020
TCAATCTGTG TGAAGGGCAG GGCCACAGGG GCGCTCTGGA GGTGGGCACC 1070
|
