Tag | Content |
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EnhancerAtlas ID | HS130-12543 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr19:19554950-19556300 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr19:19556025-19556045 | GCAGTGTGGTTGTTTGGGGT | - | 6.7 | SPI1 | MA0080.4 | chr19:19555814-19555828 | CACTTCCTCTTTCT | - | 6.51 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_01191 | chr19:19555631-19556198 | Adrenal_Gland | SE_09215 | chr19:19553567-19560399 | CD14 | SE_11973 | chr19:19554635-19555539 | CD3 | SE_13867 | chr19:19554313-19556569 | CD34_Primary_RO01536 | SE_14578 | chr19:19553495-19560387 | CD4_Memory_Primary_7pool | SE_17695 | chr19:19554092-19560589 | CD4p_CD25-_CD45RAp_Naive | SE_18023 | chr19:19554249-19559856 | CD4p_CD25-_CD45ROp_Memory | SE_18475 | chr19:19553644-19558270 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19438 | chr19:19554080-19557922 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20088 | chr19:19554282-19564647 | CD56 | SE_21336 | chr19:19553752-19559528 | CD8_Memory_7pool | SE_22348 | chr19:19554073-19564516 | CD8_primiary | SE_24291 | chr19:19554791-19555517 | Colon_Crypt_2 | SE_24291 | chr19:19555698-19556189 | Colon_Crypt_2 | SE_32371 | chr19:19554767-19556243 | Gastric | SE_42846 | chr19:19554691-19556202 | Lung | SE_45301 | chr19:19555720-19556331 | NHLF | SE_50636 | chr19:19554726-19555591 | Sigmoid_Colon | SE_50636 | chr19:19555624-19556260 | Sigmoid_Colon | SE_53638 | chr19:19554652-19556415 | Spleen |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I019443 | chr19 | 19554462 | 19559408 |
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Enhancer Sequence | CCCTGCTCAG TACCTGGGGC ACATCTGACT ACCACTCCAG TACCCTGACT CTATGATGAA 60 AACCATTCTC CCCTCCCCAT TGGTATTGCC CATCCACAGC AGTCGTAGCC CATCACGAGT 120 GGATAAAGTA GGTGGTTAGC TGGACTTGCA CATGACTTGT TTCGTGAACA GTAGTGCTTA 180 GAGTTGTGAT CTAGGGACCC AGCGAACAGT GTGTGAGGGA CTTCAACCCT GCCTCTCTCC 240 GGTATGTGCT GTGCCTGCTG TGCCCCCCAC TCCAGTGTTC TCCTTGGGGC TCCTGAGGCA 300 GCTCCCAGTA GGAGGCCTAT CGTTGTTGGC ACCCCAAGGG TGTCCCTGAT CCCTAAGTAG 360 AAACTTAAGC AGGTATTTGG ACAAATAAAT GAGTGAAACA CCTTGTGACG TTGAGGCCTG 420 TGGCACTTCC CCAATAGTGT GTTAGTGTAA AACCACCGTG TATGATGCCT GTTGGTCCCA 480 GCACTTTGGG AGGCCAAGGC ATGTGGATCT CTTGGGCCCA GGAATTTGAG ACCACCCTAG 540 GCAACATGGC GAGACCTCGT CTCTACAAAA AGTACAAAAA TTAGCCAGGT GTGGTGGTGC 600 GTGCCTTTAG TCCCAGCTAC TCAGGAAGTT GAGGTGGGAG GATTGCTTGA GCCCTGGAGG 660 TTGAGGCTGC AGTGAGTCAT GATTGTGGCT CTGCACTCCA GCCTGGACAA CAGAGTGAGA 720 CCTCGTCCCT TAAAAAAAAA AAAAAAAAAG CCACCATGGC AGTTTTGTTT TATTTGGATT 780 TTAGGCAGTG TAGGGCCTGT GATAAGGCCT GGCTGAGGTG GGGCTCTGCT GGTAGTAACT 840 CTTGTGATTC CAGCCCTCTG AGGCCACTTC CTCTTTCTGC CTTGGCTCCT CCTTGGTGAA 900 TTCTCCCTTA TGTGTCCCAC ATTCTCATAC TCCCAGGCAT TGGATCTTTA GCTGGGAGAT 960 GGTTCTGAGT TCCCATGTGT ACAGTGGGCT TGCTGCAGCC TCCTGCAGTT GTCCTGTAGG 1020 ACTCGTGGTT GGTGGTGACA TAGAGGCTGC CTACCCTGAT GGCTGATGGC TGATGGCAGT 1080 GTGGTTGTTT GGGGTCTTGT TGTATAAAAG GAGCATGTTT ACTGAAGGAC CCAGTTCTGT 1140 GCTGTTGGGG TCACAGCAAA CCTGCTTTTG CCTGTTAGTA TTTTAGTAGC TCTAGAGGGG 1200 TTCATGGCTA TTGGAATTAG TATTTTTGTT TTTGTTTTCT TTTCTCACCT CTTTAAAAAA 1260 GCATGTAAAA TTCACATGGT AGAATATTCA CCAGTTTTAA CGTTTTTAAA GTGTGTTGTT 1320 TAGTGGCATT TAACCCATTC ACAGTATTGT 1350
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