Tag | Content |
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EnhancerAtlas ID | HS130-12531 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr19:18569860-18572270 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr19:18570799-18570810 | TTTTATGGCTC | - | 6.14 |
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| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_01013 | chr19:18570706-18572741 | Adrenal_Gland | SE_06012 | chr19:18570472-18572983 | Brain_Hippocampus_Middle | SE_23216 | chr19:18570560-18571677 | Colon_Crypt_1 | SE_23893 | chr19:18569895-18570354 | Colon_Crypt_2 | SE_23893 | chr19:18570591-18570836 | Colon_Crypt_2 | SE_23893 | chr19:18570880-18571579 | Colon_Crypt_2 | SE_23893 | chr19:18571685-18572129 | Colon_Crypt_2 | SE_26168 | chr19:18570408-18572157 | Duodenum_Smooth_Muscle | SE_26932 | chr19:18570667-18573176 | Esophagus | SE_31681 | chr19:18570731-18572664 | Gastric | SE_41123 | chr19:18570485-18573111 | Left_Ventricle | SE_41560 | chr19:18569881-18570405 | LNCaP | SE_41560 | chr19:18570655-18573168 | LNCaP | SE_42344 | chr19:18570637-18572709 | Lung | SE_44495 | chr19:18570573-18572419 | NHDF-Ad | SE_46271 | chr19:18569670-18572362 | Osteoblasts | SE_47511 | chr19:18570846-18571845 | Pancreas | SE_48120 | chr19:18566935-18573376 | Psoas_Muscle | SE_48694 | chr19:18569737-18570446 | Right_Atrium | SE_48694 | chr19:18570515-18572905 | Right_Atrium | SE_50125 | chr19:18569695-18570438 | Sigmoid_Colon | SE_50125 | chr19:18570516-18573140 | Sigmoid_Colon | SE_51145 | chr19:18566712-18574014 | Skeletal_Muscle | SE_52434 | chr19:18569863-18570520 | Small_Intestine | SE_52434 | chr19:18570522-18572360 | Small_Intestine | SE_53541 | chr19:18570544-18572320 | Spleen |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018458 | chr19 | 18569759 | 18572635 |
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Enhancer Sequence | CTAATTTTTT GTATAGATAG GATCTCAGTA TTTTGCATAG GCTGGTCTCG AGCTCCTGGC 60 CTCAAGGATC CTCCCACCTC AGCCTCCCAA AGTGCTGGAA ACAGGCGTGA GCCACCGCGC 120 TGGGCTCCAC CCCATTTCTG ATCACAACTC CCAGGGAAGA GTCAGCCACG GCTGGGGATG 180 CTGGGTGAGG GGTACCTCTG GGGCCACGTC TGAGCCCACC TTCCCTACAA CCAGCCTGCC 240 TTGCTGTTGC CGGTTGACCA AAGCTAAGTT CGTCTCCCAG ACTGCTAACA AAGATGGATT 300 CAGAACGTCT GCCTTAGAGG GATCTGAGGA AGCTCCAGGT CACTGCCCTG AGTGGGTGCT 360 GCGTGCTGGC CTACAGGGCA CTCTGGTCTC CATCTTGCTG CAGGCATAGC AGTCACTGTT 420 TTCTGCTGCA TCTGACATGG CTCTGCGTCA CAGCGTATCC CATGGGGAGC ATTTTTTTTT 480 TTTTTTTGAG ATGGAGTCTC GCTCAGTTGC CCAGGCTAGA GTGCAATGGC GCTATCTTGG 540 CTCACTGCAA GCTCCGCCTC CCGGGTTCAC GCCATTCTCC AGCCTCAGCC TCTGGAGTAG 600 CTGGGACTAC AGGCACCCGC CACCACGCCC GGCTAATTTT TTTGTGTGTG TATTTTTAGT 660 AGAGATGGGG TTTCACCATG TTAGCCAGGA TGGTCTCGAT CTCCTGACCT CGTAATCCAC 720 TTGCCTCGGC CTCCCAAAGT GCTGGGATTA CAGGCGTGAG CCACCGCGCC CGGCCCATGG 780 GGAGCATTTT TAACAGTTGA GTAATATCCC ACCCCCAAAC TGCTGCCAGT TTCTCTGTAG 840 CATAAACAGA CATTACTGTG TGCAGTTTTT TTCAGGTTGG CAACAGTTTC CTTCGACGGG 900 ATTCCCAGAA GCCAGATTAG TAGGTCAAAG GCTGAATATT TTTATGGCTC ATGACAGGCT 960 TTGCTAAATA TTACTCAGCC GTCAACACCC CTCCCCTTGA AGGATAGGCT TGCGGGTTTC 1020 CCTGGGGCTC AGCCAGTCCT AGAGGTGGAC ACCTTCCATC TCTGCTCTAG ATTTTTCCAC 1080 AGAGGGAGGG CCAAGCACCT TTGAGGCATG CAGTTTTGTC ACTGCCATTC CTCAGCATGT 1140 CTGAGGGCCT GTGAGGGGCT GGAAATGACC AGTCTGGGTG AGGCACATCC CCCTCCTCTT 1200 CTACAAGCCA ACAGTGTCCT GCTGACCCCC ACAGCTGCTT GGGGGGAAGC AGCTGCATAA 1260 TGAATATAGA AGCAAGAAGC AGACGAGCTG TCCAGGGGAA GTCACAGTGG CACAGGAAGG 1320 GACAATCTGC CTGCAGATGC TGGCCAGGCC TGCTCCCAGG AGGCACTGAA CCAAAGTCAC 1380 CTGGAGAAGC CAGGCACCAG CACAGACACC TCCTGGCCAG GCCAATGCAG GTCCCACATC 1440 TGATGACTCC ATCGAGCTCC CTTCAGCAAC TCCTGCTGGC ACCATGCCAG CCCTAGCCTT 1500 GGGAGCAGGA TGGGGGTGGA CGAGGGCCAG GCTGACATCC TCCCAAGGAA TGTGGAACAG 1560 GGTCCCACCA GCCGCGCACC CGAGAGGGAC GCCTATGAGG AGCTCCGTAA ACATGGAAGA 1620 ACGTCCTTTA TACAGCTGCT ATCCCGGCAT GCCACAGCAT GTGCTTTTTG CTGCAGGCAT 1680 CACCTGTGTT CCTGAGGTGC TGGATGTGAC CCCGAACATC CCACTTCCAT CATCCTAAAA 1740 GGTGCAAGAG GCTCAGCCAT GTCTCTTCCT CCACCACAGC AGCGATCCGA GGAGACCCAT 1800 CCTCAGTTCA CCTCAAGGCT GCATCTGCAT AGCCTGGCTA ATGTTCTGAA GCCAGTGCGA 1860 GTCACTCCCC TTCCCAGGGA CCCCAGGAAG CCAAGGTGGA GCCTCAGGAA CCTCCATGGG 1920 TGAGGGGGGT GGAAGGCAGT CAGGGCCATC GCACCTGCTC CAATGCCCGG GGTGTTTCTC 1980 AAGAGCAGGC TCCACTCGCC AGCACCACAT TCCAGATGGC CTAGCCTCCA ACCCCAGGGA 2040 GGGGCACTGC AGGTCACAGA TGGAAGCCTG ATGGTCTGAG ACGTGAAGCC CCTCACCCGG 2100 AGGCGCAGGT GGAGGGCGGC AGGCAGCTGA TTCACACTGA GGCCTGCCAG GCTCTGCCAG 2160 GCACGTGTAG ATTCCTTCCC CAGGCCTTGA GTCCACAAAT CGTCTGCAAC TGAAGCCTGA 2220 ATCCACTGTG CCAGGCCCCA CGGCCCGTGT GTCAGCAGAC AGTGAAGGAG GGCCTGGGCT 2280 CCATGCTGAG TCCACCTCTC AACCCTGGAC AGTCGGGGCC ATGCCCAGAA ACGCATCCAT 2340 GGCCCCCTAA GCTTGTTCTA ATCCAGGAGG CCCTGGCTCT CAGGCAGGTT CTGAACCTGT 2400 GAGAGACCCC 2410
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