Tag | Content |
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EnhancerAtlas ID | HS130-12528 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr19:18411290-18417000 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:18416318-18416336 | CCACCCTTCCTTCCCTCC | - | 6.75 | EWSR1-FLI1 | MA0149.1 | chr19:18416322-18416340 | CCTTCCTTCCCTCCTCCT | - | 6.94 | GSC | MA0648.1 | chr19:18416001-18416011 | GGGGATTAGC | - | 6.02 | IRF1 | MA0050.2 | chr19:18414641-18414662 | TTCTGGTTTCTTTTTCTTTTT | + | 7.04 | Nr2f6(var.2) | MA0728.1 | chr19:18411602-18411617 | TGAACTCCTGACCTC | - | 6.22 | ZNF263 | MA0528.1 | chr19:18415320-18415341 | GGAGGAGGAGGAGGAGGAGAG | + | 10.75 | ZNF263 | MA0528.1 | chr19:18415317-18415338 | GAAGGAGGAGGAGGAGGAGGA | + | 11.01 | ZNF263 | MA0528.1 | chr19:18415240-18415261 | AGTGGAGGAGGATGGAGGAGG | + | 6.04 | ZNF263 | MA0528.1 | chr19:18415206-18415227 | AGAGGAGGGGGATGGGGGATG | + | 6.06 | ZNF263 | MA0528.1 | chr19:18415203-18415224 | GAGAGAGGAGGGGGATGGGGG | + | 6.1 | ZNF263 | MA0528.1 | chr19:18415329-18415350 | GGAGGAGGAGAGAGGGATGGC | + | 6.1 | ZNF263 | MA0528.1 | chr19:18415250-18415271 | GATGGAGGAGGAGGGGAATGG | + | 6.35 | ZNF263 | MA0528.1 | chr19:18415271-18415292 | GGAGGAAGATGGGGAGTGAGA | + | 6.39 | ZNF263 | MA0528.1 | chr19:18415280-18415301 | TGGGGAGTGAGAGGAGGGGGA | + | 6.45 | ZNF263 | MA0528.1 | chr19:18415186-18415207 | GGAGGAGAGGAGGAGGAGAGA | + | 6.5 | ZNF263 | MA0528.1 | chr19:18415183-18415204 | AGAGGAGGAGAGGAGGAGGAG | + | 6.68 | ZNF263 | MA0528.1 | chr19:18415295-18415316 | GGGGGATGGGGGAGGAGAAGG | + | 6.68 | ZNF263 | MA0528.1 | chr19:18415326-18415347 | GGAGGAGGAGGAGAGAGGGAT | + | 7.29 | ZNF263 | MA0528.1 | chr19:18416318-18416339 | CCACCCTTCCTTCCCTCCTCC | - | 7.33 | ZNF263 | MA0528.1 | chr19:18415289-18415310 | AGAGGAGGGGGATGGGGGAGG | + | 7.44 | ZNF263 | MA0528.1 | chr19:18415246-18415267 | GGAGGATGGAGGAGGAGGGGA | + | 7.47 | ZNF263 | MA0528.1 | chr19:18416321-18416342 | CCCTTCCTTCCCTCCTCCTCT | - | 7.56 | ZNF263 | MA0528.1 | chr19:18415243-18415264 | GGAGGAGGATGGAGGAGGAGG | + | 7.74 | ZNF263 | MA0528.1 | chr19:18415191-18415212 | AGAGGAGGAGGAGAGAGAGGA | + | 8.38 | ZNF263 | MA0528.1 | chr19:18415256-18415277 | GGAGGAGGGGAATGGGGAGGA | + | 8.39 | ZNF263 | MA0528.1 | chr19:18415302-18415323 | GGGGGAGGAGAAGGAGAAGGA | + | 8.39 | ZNF263 | MA0528.1 | chr19:18415308-18415329 | GGAGAAGGAGAAGGAGGAGGA | + | 8.5 | ZNF263 | MA0528.1 | chr19:18415197-18415218 | GGAGGAGAGAGAGGAGGGGGA | + | 8.91 | ZNF263 | MA0528.1 | chr19:18415311-18415332 | GAAGGAGAAGGAGGAGGAGGA | + | 9.08 | ZNF263 | MA0528.1 | chr19:18415305-18415326 | GGAGGAGAAGGAGAAGGAGGA | + | 9.12 | ZNF263 | MA0528.1 | chr19:18415253-18415274 | GGAGGAGGAGGGGAATGGGGA | + | 9.1 | ZNF263 | MA0528.1 | chr19:18415314-18415335 | GGAGAAGGAGGAGGAGGAGGA | + | 9.36 | ZNF263 | MA0528.1 | chr19:18415323-18415344 | GGAGGAGGAGGAGGAGAGAGG | + | 9.5 | ZNF263 | MA0528.1 | chr19:18415194-18415215 | GGAGGAGGAGAGAGAGGAGGG | + | 9.79 | Zfx | MA0146.2 | chr19:18413183-18413197 | GAGGCCGAGGCGGG | - | 6.01 | Zfx | MA0146.2 | chr19:18416786-18416800 | CAGGCCCGGGCCCC | - | 6.53 |
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| Number of super-enhancer constituents: 54 | ID | Coordinate | Tissue/cell |
SE_01679 | chr19:18411414-18413401 | Aorta | SE_01679 | chr19:18413437-18420591 | Aorta | SE_02760 | chr19:18414727-18416605 | Astrocytes | SE_02921 | chr19:18414021-18414696 | Bladder | SE_02921 | chr19:18414789-18416599 | Bladder | SE_03482 | chr19:18414053-18414754 | Brain_Angular_Gyrus | SE_03482 | chr19:18414885-18416416 | Brain_Angular_Gyrus | SE_05533 | chr19:18413902-18418798 | Brain_Cingulate_Gyrus | SE_08373 | chr19:18411569-18413066 | Brain_Inferior_Temporal_Lobe | SE_08373 | chr19:18413601-18419520 | Brain_Inferior_Temporal_Lobe | SE_08865 | chr19:18414915-18416287 | Brain_Mid_Frontal_Lobe | SE_10202 | chr19:18413426-18419089 | CD19_Primary | SE_11066 | chr19:18411381-18419855 | CD20 | SE_11848 | chr19:18411687-18413154 | CD3 | SE_11848 | chr19:18413590-18416750 | CD3 | SE_14128 | chr19:18413678-18416805 | CD34_Primary_RO01549 | SE_15471 | chr19:18413651-18416865 | CD4_Memory_Primary_8pool | SE_15863 | chr19:18411717-18412372 | CD4_Naive_Primary_7pool | SE_15863 | chr19:18413726-18416594 | CD4_Naive_Primary_7pool | SE_16357 | chr19:18413603-18416893 | CD4_Naive_Primary_8pool | SE_16887 | chr19:18413915-18418854 | CD4p_CD225int_CD127p_Tmem | SE_19934 | chr19:18413705-18419129 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19999 | chr19:18411998-18413294 | CD56 | SE_19999 | chr19:18413298-18418460 | CD56 | SE_21483 | chr19:18413875-18416845 | CD8_Naive_7pool | SE_22027 | chr19:18411871-18413166 | CD8_Naive_8pool | SE_22027 | chr19:18413559-18418722 | CD8_Naive_8pool | SE_22337 | chr19:18411505-18419257 | CD8_primiary | SE_24690 | chr19:18411717-18412311 | Colon_Crypt_3 | SE_24690 | chr19:18414046-18414654 | Colon_Crypt_3 | SE_24690 | chr19:18415274-18416550 | Colon_Crypt_3 | SE_30752 | chr19:18413652-18416755 | Fetal_Muscle | SE_33140 | chr19:18415265-18416502 | H1 | SE_34794 | chr19:18411174-18413246 | HeLa | SE_34794 | chr19:18413252-18416774 | HeLa | SE_44560 | chr19:18411367-18413069 | NHDF-Ad | SE_44560 | chr19:18413922-18416794 | NHDF-Ad | SE_44942 | chr19:18411542-18412842 | NHLF | SE_44942 | chr19:18414033-18416757 | NHLF | SE_47577 | chr19:18415273-18416480 | Pancreas | SE_49485 | chr19:18411618-18412857 | Right_Ventricle | SE_49485 | chr19:18414064-18414710 | Right_Ventricle | SE_49485 | chr19:18414757-18416554 | Right_Ventricle | SE_52990 | chr19:18413901-18423828 | Small_Intestine | SE_54160 | chr19:18413595-18420662 | Spleen | SE_54691 | chr19:18413912-18419353 | Stomach_Smooth_Muscle | SE_55149 | chr19:18414007-18416466 | Thymus | SE_59111 | chr19:18389483-18418456 | Ly3 | SE_61379 | chr19:18395257-18419023 | HBL1 | SE_61915 | chr19:18389769-18420206 | Toledo | SE_68630 | chr19:18390487-18416372 | TC71 | SE_68631 | chr19:18390487-18416372 | TC71 | SE_68632 | chr19:18390487-18416372 | TC71 | SE_68759 | chr19:18414049-18416551 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 7 | Chromosome | Start | End |
chr19 | 18415031 | 18416060 | chr19 | 18414094 | 18414690 | chr19 | 18414777 | 18414878 | chr19 | 18416875 | 18416965 | chr19 | 18414041 | 18415200 | chr19 | 18411710 | 18412502 | chr19 | 18412973 | 18413176 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018300 | chr19 | 18411200 | 18419430 |
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Enhancer Sequence | TGTCAAACTC CTGACTTCAG GTGGTCCACC CACCTCAGCC TCCCAAAGTG CTGGGATTAC 60 AGGCATAAGC CACTGCACCT GGCCCATTTT TTTAATTTTT AATTTTTTTT CCCAAGACAG 120 TCTTGCTCTG TCACCCAGGC TGGAGTGCAG TGGCATGATC TCGGCTCACT GCAACCCCCA 180 CCTCCCAGGT TAAAGCAATT CTCCTGCCTC AGCCTCCCGA GTAGATGGGA TTACTGGCGC 240 TCACCACCAT GCCCGCCTAA TTTCTGTATT TTTAGTAGAG ACTGGGTTTC ACCGTGTTAG 300 CCAGGCTGGT CTTGAACTCC TGACCTCGTG ATCCGCCCGC CTCAGCCTCC CAAAGTGCTG 360 GGATTACAGG TGTGAGCCAC CACCCCCAGC CATTTTTTTA ATGTTTAAGG AAAACTGCTG 420 GGCAGTGAAG GTCTCCCCAG ACAATGTCAC TGAGCCCCGG CCTCCCCAAC CTGGTCTGAG 480 ATTTCAGGGG GTTTCAGAAG AAGCTGACCT TTGAGAAGGC TCTGGGGCCA GGATGTCTGA 540 GTTACTTGAT GCTGGAGGGG TGGGGCAAGG AGGGTCTGGC CCTGGTGGTG CAGAGGAGGG 600 GAGATGAGGG TGGGGAAGAC ACTTGAGGAC GTGAGGAGTA TTTTTAGGTG CTGAATGCAG 660 CCCTGAAATA TTTCCACGGC CACTCCCGAG AGCGAGCTGG GTGACTATTT CGGTGCCTGG 720 TTCCAGTGGA GGCGGGGCAG GGGTGAGTCA CTCACTGCCC AGTGGCCGCA GAGGCCAGGC 780 CCAGGCTGGG AGGCGGCTCG AAGGGCAGGA TCGCAGGCCT GCAAGGTGAA CGGTCACTGG 840 CCTGGGGCCA GGCTTCCTAA GCCAGCCTCC AGGGCACAGA GGACAGCGGC CTTTCTATTC 900 CCCATGGCAC TGGCCAATCC AGAGGGGCCA CTGCCTGGGT GCCCTGGGAC AATGAGCTGC 960 TCACGCCAAC CCCATAGTTG TAAAGATGGA GGGTCCCCCG TGAGGTTCTG GACACCCCAC 1020 AGGTGCTAGG CGAGATGCCA TCTTAGATTA TTTCAAGCAT TTATTGAGCA CTTGCTGTAT 1080 ACCAGGCCAG TCCTAAAATG ATTACTGGCA TCCTCCCTTC ATGCAATCTG CCCAATAACC 1140 CCCATGAGGT AGAGCTGCTG TTATCCCCCC GACCAGGGAG GAAACTGAGG CACGGTAGGG 1200 TTAAGCCCTC CAGGCACCTA ACTATGTGCC TCAAATCCTG TCCCTCAGCT GATGTTACAA 1260 TCAGGGGAGT GAGTTTTAAA GCAGCAGCCG ATCTTGCTTA CCCCCCACAC CCTATTCCCA 1320 ACCAATTTTG GGGTCCTGAC TGTGCCTGAG CTGGGAGAAG GTCAATGGAT CCTTCAGGTT 1380 TAAGGAGGCA GTGGAAAGAG GAGGTCACCA TTGCTGTGTG ACCTGGGGCA GGTTCCTCAC 1440 CCTCTCTGTG CCTGAGCAGT GAATGACGAT GCCACCCTAT GGGTGAGTTC CGGAGCTGCC 1500 TGGCACACAT TCATGATAGA TAAACAATGG TTGGCTGAGC ATACTGGCTC AGGCCTGTAA 1560 TCCCAGCACT TTGGGAGGCT AAGGTGGGAG GATCGTTTGA GCCTAGGAGT TTGAGACCAG 1620 CCTGGACAAC ATGGTGAGAC CCCTATCTGT AAAAAAAATA AAAAACAATT ATCGGCTGTT 1680 GCTTGGATTG TGTGCCTGTC CTGAGCCTTC ATTTCTCCAT CTGTGAGGAC CCTCGGAGGT 1740 GCTGGGTTGG AAGTGGCTTT GGAAACCCAC GGGGCTGAGC GGCAAGGCTG AGTGGGAGCT 1800 CGGGGAATCC TCGCCCTCAC TCGAAGTCTC CTTGAGAAGA GGCTGATGCT TGGCCGGGCG 1860 AGATGGCTTA CGCCTGTAAT CCCAGCACTT TGGGAGGCCG AGGCGGGCGG ATTGCCCGAG 1920 GTCAGGAGTT CGAGACCAGC CTAGCCAACA TGGCGAAATC CTGTCTCTAC TAAAAAATGC 1980 AAAAATTAGC TGGGCGTGGT GGCGGACGCC TGTAATCCCA GCTATTCGGG AGGCTGAGGC 2040 AGGAGAATTG CTTGAACCTG AGAGACAGAG GTTTCAGTAA GTGGAGATCG CGCCACTGCC 2100 CTCCGGCCAG GGCGACAGAG TGAGACTTTG TCTCAAAAAA AAAAAAAAAA AAAAGAAGTG 2160 GCTGATGCCA AGCGTCAGGA ACAGATCCCT GCAAGTGCCC ACCCCAGCTC CTGTAGGGGC 2220 TTCTTTTTTA TTTTATTTTA TTTTATTTTT TCTTTTGAGA CGGAGTCTTG CTCTGTCGCC 2280 CAGGCTGGAG TGCAGTGGCG TGATCTCCGA TCACTGCAAG CTCCGCCTCC CTGGTTCGCG 2340 GCATTCTCCT GCCTCAGCCT CCCAAGTAGC TGGGACCACA GGCGCCCACC CGCCTTGCCT 2400 TCCCAAAGTG CTGGGATTAC AGGCATGAGC CACCGCGCCC GGCCCTGTAG GGGCTTCTGG 2460 CCTGAGCCCT GACCCCCTCT GCCCCTTCCC CACAGAAGTT CAGAGGCTCC GTGCTTGCAG 2520 TTCCTCCACC TGTTCCGGCT CTCTCTGTGT GGCCAGCAGC TTCTTGTCCA CTCGAGACTT 2580 GGTTTGACTG GACCTCCTCT TAAATTTTTA AAAAATTTTT AATTTATTAT TAGTAGTATC 2640 ATTTTTTTGA GACAGACTCT CGTTCTGTCG CCCAGGCTGG AGTGCAGTGG CGCTATCTTG 2700 GCTCACTGCA ACCTCTGCCT CCTGGGTTTA AGCAATTCTC CTGCCTCAGC CTCCTGAGTA 2760 GCTGGGATTA CAGGCACCAC GTGCCACCAC ACCTGGCTAA TTTTTGTATT CTTAGTAGAA 2820 ATAAGGTTTC ACCTCGTTGG CCAGGCTGGT CTCAAACTCC TGGCCTCAGG TGATCCGCCT 2880 GCCTCGACCT CCCAAAGTGT TGGAATTACA GTTGCCGCTG TGAGCCACAG CACCCAGCCG 2940 GCCTCCTCTT GCTCTGTGGA AAGGAGGTGC CACCTCGGGG TCCTGCACTT CCTGGGCAAG 3000 GCCAGCTGGT CAGCCTAGGC CCTGGCAGCC TCCTCCTCCC TGCCCTGAGG CCCCAGCACT 3060 GCCCCCTTCC TGCTTCCACC CCTGCTTCTG ACTGTTCCAG AACCCTCTGT GGCTGCTTCT 3120 CATGTCACTC AGGGCCCACA TCCTCCCCAT TTCCTGCCCT TCTGTTTGCT CCTGTGTCCC 3180 CTGGGCACAG GGCCTTTGCA CGGGACTGTC CTCCTGACCC CTGCTGGTCC AGAATGTTCT 3240 TTCCCAAGGT GGCTGGCTCC CTCGTCTCTC AGGCCCTTCC TGAATCTTCA GTGTCCTTCT 3300 CTCACCTTCC CTGACCACCT CTTCATTCAC CTCCTCACGA GCCCGCCCTG TTTCTGGTTT 3360 CTTTTTCTTT TTTTTGAGAG TCTCGATCTG TCGCCCAGGC TGGAGTGCAG TGGCGCGATC 3420 TCAGCTCACT GCAACCTCCG CCTCCCAGGT TCAAGCGATT CTCCTGCCTC AGCCTTCTGA 3480 GTAGCTGGGA TTACAGGTTT GTGCCATCAC GTCCGGCTAA TTTTTGTATT TTTAATAGAG 3540 ATGGGGTTTC ACCATGATGG CCAGGTTTTG AACTCCTTAT CTCAGGTGAT CCGCCCACTT 3600 CGGCCTCCCA AAGTGCTGGG GTTACAGGCA TGAGCCACTG CGCCTGGCCT GGTTTCTTCT 3660 TTTTACAGCA TTTATGCATT TGATATGCAT ATGCTTGTGG CTGGCTCACT CCTGTGGAAG 3720 GGAAGGATTG CCGGGGCTGT GTCACCAGCA CCTGGGACAA GGCAAGTGGC CCTAGTGCCA 3780 GGCTCGTGCC AGGCCCTGGG CTCCAAAAGA AGAAGGTGGG GAGGGAGGTG ACAGGGACAC 3840 AGGCCATCTG GGGGTGGCTG TCAGAGTAGT GCTGGGAACA GCAGGTGAAG CCCAGAGGAG 3900 GAGAGGAGGA GGAGAGAGAG GAGGGGGATG GGGGATGGGA GTGGGGGATG AGTGGAGGAG 3960 GATGGAGGAG GAGGGGAATG GGGAGGAAGA TGGGGAGTGA GAGGAGGGGG ATGGGGGAGG 4020 AGAAGGAGAA GGAGGAGGAG GAGGAGGAGA GAGGGATGGC TTCCCACAGC TGCCTCTCGG 4080 GGGCCACTGC CCAAGGCCAG CCTCTGCACT TTTGTCCCTG AAGCGGGTGT TTGGCTCCAG 4140 GATGAGGTGG CGTCAGCAGC CGACCCGGGC CTGTCGCACT CTGGCGGGGG ACTGTGGGCT 4200 GGCCCTGCAG AGCTCAGCCC CCGGCTGAGT CACAGCACAG CGCCAGGCGT GGGCCTCCCT 4260 AACAGAAAGC AAACTCCAGG CGAGAAGGTC TGGGGGCGGG TGGGGACCAT CTACGATAAA 4320 GGCAGCCCCA GTTGGGTGAG GAGGGCACAG ACCATCGGAG GGACAGAAAG ACCTGGAAGC 4380 CTTGGATTTA GGAACTAGAC TGGTGCTTTT GGTTTCTTTT CTTGTTGAGG GGGCTGAGGA 4440 TGAGGCTTTG TGAAACCAAC CAGGAAGAAT GAAACACAGA GCTGGTCCGA CACCCAGCTC 4500 GAGGGAGGGG GGCCGGAAGC TTCTGGAAGT TGGCTGCCCC TAAGCAGGGG CCACTCTAGC 4560 CCACAAGGCC AAGTTGGCAG AGGCAGACGA GGGGACTCTG CGGCTCAAGT CACGGGCCAG 4620 GAGCCCGCAG CTGCCGGGCT GGAAAGGTCA GAGCCGGCTC TGCGTCTGGC TGCGCCGGCA 4680 AGAAGCCACA ATTACGCAGG CAAAAGAGCC CGGGGATTAG CCCCAGCACC TGGGACCCTG 4740 AATGGTGAGA AGGCACCTAG GGGGTGTTGG AACACATTCT GAGTTCAGAG CCTGGTCAGG 4800 GAGAAAAAAC CAAACGGAGA TCAGGAAGGG GAAGGGGCCT TCGAGGGCTT TCCCATCCCA 4860 ACTTCCCAGG ATGCCTGACC CCAGAGCTCC TGGATTTGAT CCACGCCTCG TGACACACAC 4920 AACCCCTGGG AGGAAGGAGC CCAGGCCCCT TGGAGAGCCC CAGAGGCCTC TAAGGGCCGG 4980 TGAGTCTAGG ACATGGGGCA GGAGCTGCAA ATGGGGCCTC CCTGCTCCCC ACCCTTCCTT 5040 CCCTCCTCCT CTAAACATTG CCCCACCCAC CTCGCCCTGT GAGCCCAGCC CCCTGCACGG 5100 CCCACACTGT AGGGGCATGG GGTGTGCCAA GAGATGCTCC TGTCGACCAG GCGCAGTGGC 5160 TCATGCCTGT AATCCCAGCA CTTTGGGAGG CCAAGGCGGG AGGATCACTT GAGATCAGGA 5220 GTTCAAGACC AGCCTCGCCA ACATGGTGGA ACTGTGTCTG TACTAAAAAT ACAAAAATTA 5280 GCCGTCTGTG TTGGTGCACA CCTGTAATCC CAGCTACTCA GGAGGCTAAG GCAAGAGAAT 5340 CGCTTGAACA CACGAGGCAG AGGTTGCAGT GAGCCAAGAT TGTGCCACTG CACTCCAGCC 5400 TGGGCAACAG AGCGAGACTC CGTCTCAAAA AAAAAAAAAA AATGCTCTTG TCCAACAGGC 5460 AGGTGGGTGC CGTGGGCCGG TGCATCCCAA GGCTTCCAGG CCCGGGCCCC CAACTGCTGC 5520 CCCTGCCTGT GTTGAGGGGG CGGGTTTGTG AGGTTCAGGG CAGGCCACAT CCTGGACCCC 5580 ACATGCCCCA TCTCTAACCA TCAATCAAGT GCCGCTGTGG CGGAGAGGAT TCAGGCGACT 5640 GCAGATATCC ATCCCTGTCC CCCACCCCAC ACACAAGGAG AACATCCCAG GCGAGGACAT 5700 TGTAAATGCA 5710
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