Tag | Content |
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EnhancerAtlas ID | HS130-12524 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr19:18228380-18229560 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EGR1 | MA0162.3 | chr19:18228781-18228795 | CCCGCCCCCGCACT | + | 6.21 | EGR3 | MA0732.1 | chr19:18228780-18228795 | CCCCGCCCCCGCACT | + | 6.83 | EGR4 | MA0733.1 | chr19:18228780-18228796 | CCCCGCCCCCGCACTC | + | 6.16 | KLF14 | MA0740.1 | chr19:18228423-18228437 | GGGTGGGCGTGGTA | - | 6.08 | KLF16 | MA0741.1 | chr19:18228599-18228610 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228764-18228775 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228779-18228790 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228599-18228609 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228764-18228774 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228779-18228789 | GCCCCGCCCC | + | 6.02 | SP1 | MA0079.4 | chr19:18228761-18228776 | CAGGCCCCGCCCCCA | + | 6.56 | SP3 | MA0746.2 | chr19:18228424-18228437 | GGTGGGCGTGGTA | - | 6.37 | SP4 | MA0685.1 | chr19:18228761-18228778 | CAGGCCCCGCCCCCAAC | + | 6.57 | SP8 | MA0747.1 | chr19:18228424-18228436 | GGTGGGCGTGGT | - | 6.32 | Zfx | MA0146.2 | chr19:18228761-18228775 | CAGGCCCCGCCCCC | - | 6.19 |
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| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_03607 | chr19:18228860-18229540 | Brain_Angular_Gyrus | SE_04405 | chr19:18228707-18231550 | Brain_Anterior_Caudate | SE_05422 | chr19:18228732-18231107 | Brain_Cingulate_Gyrus | SE_06334 | chr19:18227733-18231497 | Brain_Hippocampus_Middle | SE_07235 | chr19:18227822-18231343 | Brain_Hippocampus_Middle_150 | SE_08343 | chr19:18228675-18231084 | Brain_Inferior_Temporal_Lobe | SE_10753 | chr19:18227967-18228613 | CD19_Primary | SE_10753 | chr19:18228829-18231042 | CD19_Primary | SE_19731 | chr19:18227880-18228741 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19731 | chr19:18228750-18231627 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22919 | chr19:18227678-18228683 | CD8_primiary | SE_22919 | chr19:18228828-18231785 | CD8_primiary | SE_60731 | chr19:18199190-18231325 | DHL6 | SE_62682 | chr19:18196873-18231497 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018117 | chr19 | 18228011 | 18232079 |
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Enhancer Sequence | GAGGACGCAG TTTTGCCAGG CTAGATTCCA AGCAGTGGGG CCAGGGTGGG CGTGGTAGCA 60 TGAGCCGGCC AGGACGCTGG GGTGGGTCTT GGGTGCCGCA CTGAGAAGGG GTCAGTGCTC 120 TGGGAGAGAG GAAAAAGATG GAGGGAGCGA TTAGATTTAC ATTTTAGCAG AAAGGAGCCA 180 AAATGCCTGC CCCTAGCTCG AGGTTAAGGT GCTGCCAACG CCCCGCCCCC GCCGCCCGCG 240 GTCGTAGCAA CGCCCGGCCT CAGCCGCCCG CGGCCCTAGC AACGCTCCGC CTCTCCGCCC 300 GCGGCCATGG CAGCGCCCCG CCCACTCGCC GGCACGCGGG TCCGCCGGCC TCGCTTCCGC 360 GTCGCTCGCT CCGCCTCCCG ACAGGCCCCG CCCCCAACGG CCCCGCCCCC GCACTCGCCT 420 GGGCGGAGTT CCAGTCGCGC TCGGGGGCGC GCGCTTCCTT CTCGCCGCCC CCCCATCCCC 480 GCAGCCCCGT GCGCCCCCCT CCCTGTCCGG CTCCGCGGGG CTCCTGGGGC CGATCCCACC 540 GCCGAGGCCT CCCTTCCCGG CCTCGGGCGG CTGCGGCGGC ACAAAGGGAA GCAGCATGTC 600 CGACCCCAGC TACTGGACGG CGGTGGCGGC TCCCGGCCAT CGGAGCCGCC TGGCAAAAGG 660 CGCGCTGCTG CAGCGCTCCA AGAGGTAGGG GGCACGGCGC CGGCGAAGGC TCGGCGGCCA 720 GCCGAGCAAA CAGGAGTTGC CAGAAGTGTG TCCTGGCCGC GTGGCGCGGA CCACGGCGAG 780 CGTCTGTCTG TGGCAGCAGT GGGAAGGGGG GAGGACGCCT GTGGATCGAG GTGTCCCCTG 840 GGGTCCCTGG CACCCTCCTT TCGCCCCTCG TTCCCTGGAC TGGGGTGTCT GTCCGCCAGC 900 GTCGCAGCTG GGGTGGTGAC AGACAGGAGT GAGTTGAGAT TGAGCTAGGA TTTGAACCCG 960 GGTGTCCAGG GCTGGGCAGA ACCAGGGAGG AACTTCTTGG AAAAACTGAG GCTGATCTGC 1020 CGCTGGGGGT CCATTCAGCA GAAATGTTGG CTCAGAAGCA AATATTTACT GCACGAGGCT 1080 GGCATTTGGG TGGGGTGTCA GGAGTCCAGA TAGTTGGGGT TAACCCCCGC CAAAGCCTCA 1140 CCGCTCTTGG AGTCTCAGTT TCCCCTTTTG AAAAGCAGAG 1180
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