| Tag | Content |
|---|
EnhancerAtlas ID | HS130-12482 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr19:16483260-16486270 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxd3 | MA0041.1 | chr19:16484228-16484240 | GTTTGTTTGTTT | + | 6.32 | | Foxd3 | MA0041.1 | chr19:16484232-16484244 | GTTTGTTTGTTT | + | 6.32 | | SNAI2 | MA0745.2 | chr19:16486097-16486107 | AACAGGTGCA | + | 6.02 | | STAT1 | MA0137.3 | chr19:16483444-16483455 | TTTCCTGGAAA | - | 6.62 | | Stat4 | MA0518.1 | chr19:16485010-16485024 | CTTCCAGGAAATGG | + | 8.12 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_10209 | chr19:16475292-16484487 | CD19_Primary | | SE_11315 | chr19:16474290-16485342 | CD20 | | SE_11937 | chr19:16473771-16485687 | CD3 | | SE_14609 | chr19:16473598-16485678 | CD4_Memory_Primary_7pool | | SE_15445 | chr19:16475158-16485044 | CD4_Memory_Primary_8pool | | SE_15848 | chr19:16475046-16485222 | CD4_Naive_Primary_7pool | | SE_16360 | chr19:16475218-16485623 | CD4_Naive_Primary_8pool | | SE_17083 | chr19:16475450-16484473 | CD4p_CD225int_CD127p_Tmem | | SE_17319 | chr19:16468964-16489910 | CD4p_CD25-_CD45RAp_Naive | | SE_18015 | chr19:16473227-16488773 | CD4p_CD25-_CD45ROp_Memory | | SE_19662 | chr19:16479191-16484507 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20143 | chr19:16473448-16485693 | CD56 | | SE_20988 | chr19:16475387-16484302 | CD8_Memory_7pool | | SE_21494 | chr19:16475691-16485519 | CD8_Naive_7pool | | SE_21927 | chr19:16475508-16486069 | CD8_Naive_8pool | | SE_22683 | chr19:16473350-16485641 | CD8_primiary | | SE_31861 | chr19:16480549-16484271 | Gastric | | SE_31861 | chr19:16484326-16485297 | Gastric | | SE_50928 | chr19:16478724-16487174 | Sigmoid_Colon | | SE_53383 | chr19:16475646-16485667 | Spleen | | SE_55459 | chr19:16478837-16484301 | Thymus | | SE_55459 | chr19:16484673-16485571 | Thymus | | SE_61491 | chr19:16432573-16510994 | Toledo | | SE_62295 | chr19:16434424-16512260 | Tonsil | | SE_66507 | chr19:16480489-16485579 | Jurkat |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I016362 | chr19 | 16473350 | 16485630 |
|
Enhancer Sequence | ACTCACATTT GGTCCTGTAT GAGCGATGAC CCACAGAGGA CGCTGGAGCC CTCTTTGAAG 60
TTCAACTCCC TGCACGCTTT TTTTAACGGA AAAGATTTCC ACTAAACTGT GACCTCACAG 120
GGAGAAAAGG GCCCAATTAA TGACTCCCAG AATGTGTGCA GCCACCTCAG CTGCCCAGCC 180
TGTCTTTCCT GGAAAAGGTG CCCATATGGC AGAAGCCTGC GTCCCGGTCC CTGTGCCGCA 240
GGGTGGGGAT GGGGGCTACA GACCACATAC AGCACGTCAC CGTGCAAGGC GCTTCACCCA 300
CACACCCACC TGCTAGGCCT GAGTGGGTCC CATGGTCAGG CAGGAAAACT GAGGCTCAGG 360
GAGGTTAAGT GACCCACCCG GGGCCTCCCT TTCCTCCAAT GTCCAGAAAC CAGCCTGATC 420
AAGCAGTCCC CTGGATTCTA GCAGAATTGG CTGCCCAGAG GACAGAAGGA AGCGGCCTCA 480
GTTCTCCTGT CCTGGCCTCA CACATCAGCC ATTTCCTGGC ACAGAGGCCT AGCAGGGTTC 540
TAGAAACCTC TGGGTGCCCT GGGATGGACA AACCCTGGAT GGGAGCATGG GACATCAGAC 600
ATGTTCCATG TGCCAGGCGG AGAGATGACA GAAAAGCTTG TTCCTTCATT GTGATTTCCA 660
TGAGTGCAGG TGTCAACGCT GTGTGCATGT TTAAGACTGC CCACTGGACA GCCTATGGGT 720
CCTTCAGACT TTTTGTCAGT CTGTCTATCT CCACCAGCTC AAGGCTCGAC CGCCAGGCTC 780
ACAGGGGGTC GCATTTCACC TTCCTCCTCA CTCAGCCACG CTGGGACCCA CGCATCTCGC 840
GCAAAGCCCC AGCATCTGGG AAGCCCTGGG GTGGCCAGGG GAAGGCGGCC GTCACTGTGT 900
GCTGGCCGTG TGGTCTCCCT GAGCAGAAAA AGCCTGGGGT AGCAAGAAAG GCAGAAAGGC 960
TTTTTTTGGT TTGTTTGTTT GTTTTAAGAA AACATAAAGT CCAGCAGTTT GAAAACGTTG 1020
GACTTTATGC TTAAAAAAAA AAAAAAAAAT TCACAGATTA GCTTCACTAT CTTCTGTCTT 1080
AAAGAAGCCA AGAAAACAAG AGATCTGCCT TGTGTCTTCC TGGCGAACTT TCTGAGCACG 1140
ACTTCACCCG ACACTCATCT GCTGACCGCT CTTGCCCATA ACCAGAGGCC TCCTGGGCTG 1200
CACGTGGGTC TGTGCCGTGT GGCCAGGAAC CGGGAAGGGA ATTGTACAGA GCCCGGCTCT 1260
GATTCCCTTG ACCAGAGAGC AAGGGTAGGG CAAGCATCTT CCTTTGCAAT TCCCCAAAGA 1320
GCCAAACACT TCTCCCCAAC ATGTGACTCA CCAAAGGTCA ACCACTGGGT CAACTCAGTG 1380
TTTGGACTGT TAGAGGTTAG TACGGAATCA CAGCACAAAT AATGCTGCAA GCTCAAACGG 1440
CAACCACCAC ACGGTCTGTA CCTACCACCC AGCAGCGAGT ACAATGCAGA ATTTTTCTGT 1500
TCAGCCATTG CTTCTGGGTA AAAGAATCAA ATGAGAAATA TTTAGGCCTC CACACAGATC 1560
TGCAGTTGCT CCGGACTTAA AATGCTGCGC GTGCATTGGC TGTTTTAGAG AATGTTCTGA 1620
AGCTCATGGC TTGGTTCTCG TTACTCCTGT CTTGGGGCAG GAGGCAGGTC ACTGGGTGTA 1680
GACCTGGCCC TGCTGCCACC TTGCTGTGTG ACCTTGGGGA GCCCCCATGA CCTCCCTCCC 1740
CGCCTTTCCT CTTCCAGGAA ATGGGCATGG CCTGGCCTGT CTCCCTCACG GGTCTTGCTG 1800
GGACCTAGTG AGATAAGAAC TGTTCAAGCA CTTCCTAAGG GCCCATCAAT GTTAATATAT 1860
TTCTGCAGAG CACCGAGTGG CACAGCAACC ATCAACCACA GCAGAACAAA GATGCAGTGG 1920
CCTGTGCCAC GAGTAAAGGA GCCCAGGACC CCCTGGGTCT CAAATTGTGC AACAGCTCCC 1980
TAAAAAGCCT GAACCCTGAA GCCAGGCCCA AGGAAGTCAC CCAAACTCCC GTTATCAAAC 2040
GTTCTACTTT TAACAAGCAT TCTTTTCTGC TTTCGAAGCC CACAGTACAC TAACAGCAGA 2100
AGCCAAGGTG GGGTGGGTAG GCTTGCAGAG GGAGACACGA TGGGAGGTGA TAACTGAGGG 2160
AAAGTTCAAA AGCAGACCCA GCGCCGGGTT TAGGTACGTG GGGAGGCGGG GGTGGCGGTT 2220
TCCATGAAAC ACTGAAAATG AAGCTTTGCA CCTGTGAGCT GTTGAGTGGG ATGGCTCCTC 2280
CTCAGGGCCC AGCAAATACG GCACTGCTCG GCAAGTGTGT GCACCCATAT GAGAATACGT 2340
GCACATGTGT GTAAATGTGT GTACACGTAT GTAAGCACAG AGTGTGCATG CCCGGGTGTG 2400
TATGAGCACA CACGCACGCA TATGTGTGTG CACGTTTGCA TGCATGCATT ATGCAATATC 2460
TGTGTAATGC TCACCTGTAT TCATGTATAT GTTCACATGT GAATATGTGC ATGTCTCAAT 2520
GAATGCATGC ACATATATAA GCATGGAGGG TGTGCATGCC CAGCTGTTAT CTATGAGAGC 2580
ATGTGTGTGT GCAGGCATGC ACAATGCAGT ATGTGAGTGC ATGCTGCTCA TCTCTATGCA 2640
TGCATGTGTG TACTGACAAG AGAATATGCA CACATGTCCA CAGATGCATA TAAGCATGGA 2700
GAGTGTGCAC GGAGGGGTGC ATGGGAGAGT GCGTGTGTGC CTGCATATGC GTACATGCAG 2760
GCACATGCGA GAATACTCAT GTGATGCAGT ATGTATGTGA ATGCATGCTC ACCTGTATGC 2820
ATGTGTGTTC ATGTGCAAAC AGGTGCATGC ATGCATGTGT CTGCAGGCGT GGAGGATGTG 2880
TGTACACAGG GTACACATGT GCATGCAAGA GCATACACGT GTACGTGCAC ATACATGCAT 2940
AAAAATACAT GGCCGCACGT GGGAATGTGC ACATGCATGT GTGCCAGCTG TGTGCATGCA 3000
TTGTGATTAT 3010
|
